RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 RNF150Q9ULK6 438 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 LAMP3Q9UQV4 416 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 PRRC2CQ9Y520 2896 aaKnown RBP12.76□□□□□ -0.37
MBD1-217ENST00000588937 CHD3Q12873 2000 aaKnown RBP12.76□□□□□ -0.37
MBD1-217ENST00000588937 A0A0G2JNJ9 132 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 C16orf97H3BN30 126 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 C15orf65H3BRN8 121 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 TOR1AO14656 332 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 TXNL1O43396 289 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 CST7O76096 145 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 CD5P06127 495 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 SSTR5P35346 364 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 HOXA4Q00056 320 aaPredicted RBP12.76□□□□□ -0.37
MBD1-217ENST00000588937 ZNF616Q08AN1 781 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 EIF4EBP1Q13541 118 aaPredicted RBP12.76□□□□□ -0.37
MBD1-217ENST00000588937 EDDM3AQ14507 147 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 CR1LQ2VPA4 569 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 ATRAIDQ6UW56 229 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 Q6ZRM9 215 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 FGFRL1Q8N441 504 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 OR2G3Q8NGZ4 309 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 ITLN1Q8WWA0 313 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 MRPL37Q9BZE1 423 aaKnown RBP12.76□□□□□ -0.37
MBD1-217ENST00000588937 SH3BGRL3Q9H299 93 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 NCOR1P1Q9H4R4 102 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 Q9UFV3 132 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 RAXQ9Y2V3 346 aa12.76□□□□□ -0.37
MBD1-217ENST00000588937 BSNQ9UPA5 3926 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 ODAMA1E959 279 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 SNAPINO95295 136 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 TFF1P04155 84 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 PTAFRP25105 342 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 ATP6V0CP27449 155 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 PPP1CCP36873 323 aaKnown RBP12.75□□□□□ -0.37
MBD1-217ENST00000588937 ASCL1P50553 236 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 ZNF273Q14593 569 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 MIDNQ504T8 468 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 ZNF808Q8N4W9 903 aaPredicted RBP12.75□□□□□ -0.37
MBD1-217ENST00000588937 TPRX1Q8N7U7 411 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 Q8NA96 180 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 LFNGQ8NES3 379 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 HSD17B10Q99714 261 aaKnown RBP12.75□□□□□ -0.37
MBD1-217ENST00000588937 TMEM231Q9H6L2 316 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 JPT1Q9UK76 154 aa12.75□□□□□ -0.37
MBD1-217ENST00000588937 K7N7A8 449 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 TSPAN4O14817 238 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 IFNA5P01569 189 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 ADCYAP1P18509 176 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 SNCAP37840 140 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 TNFAIP6P98066 277 aaPredicted RBP12.74□□□□□ -0.37
MBD1-217ENST00000588937 PEA15Q15121 130 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 TMEM182Q6ZP80 229 aaPredicted RBP12.74□□□□□ -0.37
MBD1-217ENST00000588937 ODF3L1Q8IXM7 274 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 TMEM217Q8N7C4 229 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 TCTEX1D2Q8WW35 142 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 PSENENQ9NZ42 101 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 OR6C3Q9NZP0 311 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 RNF7Q9UBF6 113 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 ZNF835Q9Y2P0 537 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 ARID1AO14497 2285 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 AGPAT2O15120 278 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 SIGLEC5O15389 551 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 CLDN1O95832 211 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 ARHGDIBP52566 201 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 RBPJQ06330 500 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 KIAA2026Q5HYC2 2103 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 ZNF561Q8N587 486 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 CD300LFQ8TDQ1 290 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 PBDC1Q9BVG4 233 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
MBD1-217ENST00000588937 IGHV3OR15-7A0A075B7D8 119 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 YPEL1O60688 119 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 CD80P33681 288 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 RPL30P62888 115 aaKnown RBP12.73□□□□□ -0.37
MBD1-217ENST00000588937 HBG1P69891 147 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 HBG2P69892 147 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 IZUMO4Q1ZYL8 232 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 RFESDQ8TAC1 157 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 FAM222BQ8WU58 562 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 YPEL2Q96QA6 119 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 DIRC2Q96SL1 478 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 SVILO95425 2214 aa12.73□□□□□ -0.37
MBD1-217ENST00000588937 DNASE2O00115 360 aaPredicted RBP12.72□□□□□ -0.37
MBD1-217ENST00000588937 CLDN14O95500 239 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 IGHV1-46P01743 117 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 SFTA3P0C7M3 94 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 IRF2P14316 349 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 CCKARP32238 428 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 SLC25A24Q6NUK1 477 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 DPPA3Q6W0C5 159 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 PUSL1Q8N0Z8 303 aaKnown RBP12.72□□□□□ -0.37
MBD1-217ENST00000588937 FAM213BQ8TBF2 198 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 Q8TCH9 128 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 C14orf79Q96F83 325 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 GCM1Q9NP62 436 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 JKAMPQ9P055 326 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 GNG12Q9UBI6 72 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 PSG11Q9UQ72 335 aa12.72□□□□□ -0.37
MBD1-217ENST00000588937 SPENQ96T58 3664 aaKnown RBP12.72□□□□□ -0.37
MBD1-217ENST00000588937 ATMQ13315 3056 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms