RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 C22orf46C9J442 243 aa21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 SLC31A2O15432 143 aa21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 PHF1O43189 567 aaPredicted RBP21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 IGHV2-5P01817 119 aa21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 KRTAP10-9P60411 292 aa21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 GNB2P62879 340 aa21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 ZBTB34Q8NCN2 500 aa21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 MSI2Q96DH6 328 aaKnown RBP21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 SSBP3Q9BWW4 388 aaPredicted RBP21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 IFI27L2Q9H2X8 130 aa21.37■■□□□ 1.01
SCAMP4-210ENST00000588555 VPS13CQ709C8 3753 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 C17orf98A8MV24 154 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 F2RP25116 425 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 S100GP29377 79 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 SSTR2P30874 369 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 CT45A1Q5HYN5 189 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 CT45A3Q8NHU0 189 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 WDR89Q96FK6 387 aaPredicted RBP21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 TMEM222Q9H0R3 208 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 CCSO14618 274 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 GIPP09681 153 aaPredicted RBP21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 LIAT1Q6ZQX7 453 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 LRTM2Q8N967 370 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 ABHD14AQ9BUJ0 271 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 SDHAF2Q9NX18 166 aa21.36■■□□□ 1.01
SCAMP4-210ENST00000588555 PPIAL4CA0A0B4J2A2 164 aa21.35■■□□□ 1.01
SCAMP4-210ENST00000588555 PPIAL4GP0DN37 164 aa21.35■■□□□ 1.01
SCAMP4-210ENST00000588555 LHFPL5Q8TAF8 219 aa21.35■■□□□ 1.01
SCAMP4-210ENST00000588555 C10orf105Q8TEF2 133 aa21.35■■□□□ 1.01
SCAMP4-210ENST00000588555 GSX2Q9BZM3 304 aa21.35■■□□□ 1.01
SCAMP4-210ENST00000588555 CHIAQ9BZP6 476 aa21.35■■□□□ 1.01
SCAMP4-210ENST00000588555 RAB18Q9NP72 206 aa21.35■■□□□ 1.01
SCAMP4-210ENST00000588555 APCP25054 2843 aa21.35■■□□□ 1.01
SCAMP4-210ENST00000588555 ANKRD17O75179 2603 aaKnown RBP21.35■■□□□ 1.01
SCAMP4-210ENST00000588555 H0Y980 276 aa21.34■■□□□ 1.01
SCAMP4-210ENST00000588555 PROP1O75360 226 aa21.34■■□□□ 1.01
SCAMP4-210ENST00000588555 ADAP1O75689 374 aa21.34■■□□□ 1.01
SCAMP4-210ENST00000588555 RAB7AP51149 207 aa21.34■■□□□ 1.01
SCAMP4-210ENST00000588555 C11orf91Q3C1V1 193 aa21.34■■□□□ 1.01
SCAMP4-210ENST00000588555 ESCO2Q56NI9 601 aa21.34■■□□□ 1.01
SCAMP4-210ENST00000588555 FAM168AQ92567 244 aa21.34■■□□□ 1.01
SCAMP4-210ENST00000588555 PERPQ96FX8 193 aa21.34■■□□□ 1.01
SCAMP4-210ENST00000588555 A0A1W2PPE3 182 aa21.33■■□□□ 1.01
SCAMP4-210ENST00000588555 SMLR1H3BR10 107 aa21.33■■□□□ 1.01
SCAMP4-210ENST00000588555 UCP1P25874 307 aa21.33■■□□□ 1.01
SCAMP4-210ENST00000588555 LMO4P61968 165 aa21.33■■□□□ 1.01
SCAMP4-210ENST00000588555 SLC25A48Q6ZT89 311 aaKnown RBP21.33■■□□□ 1.01
SCAMP4-210ENST00000588555 OR51H1Q8NH63 302 aa21.33■■□□□ 1.01
SCAMP4-210ENST00000588555 CLDND2Q8NHS1 167 aa21.33■■□□□ 1.01
SCAMP4-210ENST00000588555 MARVELD3Q96A59 401 aa21.33■■□□□ 1.01
SCAMP4-210ENST00000588555 KIAA1324LA8MWY0 1029 aaPredicted RBP21.33■■□□□ 1
SCAMP4-210ENST00000588555 VWC2LB2RUY7 222 aa21.33■■□□□ 1
SCAMP4-210ENST00000588555 NDUFS8O00217 210 aa21.33■■□□□ 1
SCAMP4-210ENST00000588555 IGHV1-8P0DP01 117 aa21.33■■□□□ 1
SCAMP4-210ENST00000588555 SRSF4Q08170 494 aaKnown RBP21.33■■□□□ 1
SCAMP4-210ENST00000588555 Q3ZCU0 254 aa21.33■■□□□ 1
SCAMP4-210ENST00000588555 NBPF19A0A087WUL8 3843 aa21.32■■□□□ 1
SCAMP4-210ENST00000588555 A0A087X0M5 115 aa21.32■■□□□ 1
SCAMP4-210ENST00000588555 A0A1B0GX30 115 aa21.32■■□□□ 1
SCAMP4-210ENST00000588555 GPR12P47775 334 aa21.32■■□□□ 1
SCAMP4-210ENST00000588555 GNG10P50151 68 aa21.32■■□□□ 1
SCAMP4-210ENST00000588555 TMEM56Q96MV1 263 aa21.32■■□□□ 1
SCAMP4-210ENST00000588555 PIMREGQ9BSJ6 248 aa21.32■■□□□ 1
SCAMP4-210ENST00000588555 GAB2Q9UQC2 676 aa21.32■■□□□ 1
SCAMP4-210ENST00000588555 TMEM56-RWDD3S4R434 201 aa21.32■■□□□ 1
SCAMP4-210ENST00000588555 LOC105371242A0A075B767 164 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 A0A1W2PPH5 198 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 G3V3Q6 166 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 B3GALNT1O75752 331 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 CDS2O95674 445 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 RBP4P02753 201 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 LIPFP07098 398 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 RAP2BP61225 183 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 ZFP69Q49AA0 526 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 CLEC2AQ6UVW9 174 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 BTNL3Q6UXE8 466 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 ODF3L1Q8IXM7 274 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 LGI3Q8N145 548 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 RAB39BQ96DA2 213 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 C18orf12Q96KH6 178 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 MAP1AP78559 2803 aaPredicted RBP21.31■■□□□ 1
SCAMP4-210ENST00000588555 C1QBP02746 253 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 ZFP36P26651 326 aaKnown RBP21.31■■□□□ 1
SCAMP4-210ENST00000588555 RPL30P62888 115 aaKnown RBP21.31■■□□□ 1
SCAMP4-210ENST00000588555 C1orf229Q6ZS94 237 aaPredicted RBP21.31■■□□□ 1
SCAMP4-210ENST00000588555 ASB13Q8WXK3 278 aa21.31■■□□□ 1
SCAMP4-210ENST00000588555 ARHGAP32A7KAX9 2087 aa21.3■■□□□ 1
SCAMP4-210ENST00000588555 MPTX1A8MV57 137 aa21.3■■□□□ 1
SCAMP4-210ENST00000588555 HOXB5P09067 269 aa21.3■■□□□ 1
SCAMP4-210ENST00000588555 SRPXP78539 464 aa21.3■■□□□ 1
SCAMP4-210ENST00000588555 C8orf31Q8N9H6 132 aa21.3■■□□□ 1
SCAMP4-210ENST00000588555 OR2T35Q8NGX2 323 aa21.3■■□□□ 1
SCAMP4-210ENST00000588555 LIN7CQ9NUP9 197 aaKnown RBP21.3■■□□□ 1
SCAMP4-210ENST00000588555 SESN1Q9Y6P5 492 aa21.3■■□□□ 1
SCAMP4-210ENST00000588555 RNF212BA8MTL3 300 aa21.29■■□□□ 1
SCAMP4-210ENST00000588555 A8MXK9 166 aa21.29■■□□□ 1
SCAMP4-210ENST00000588555 EIF2B2P49770 351 aaKnown RBP21.29■■□□□ 1
SCAMP4-210ENST00000588555 RPL39P5Q59GN2 51 aa21.29■■□□□ 1
SCAMP4-210ENST00000588555 ZNF66Q6ZN08 573 aa21.29■■□□□ 1
SCAMP4-210ENST00000588555 LYZL2Q7Z4W2 148 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms