RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 ARFRP1Q13795 201 aa12.76□□□□□ -0.37
RETREG3-206ENST00000588423 HNF4GQ14541 408 aa12.76□□□□□ -0.37
RETREG3-206ENST00000588423 C2orf68Q2NKX9 166 aa12.76□□□□□ -0.37
RETREG3-206ENST00000588423 HACD4Q5VWC8 232 aa12.76□□□□□ -0.37
RETREG3-206ENST00000588423 S1PR3Q99500 378 aa12.76□□□□□ -0.37
RETREG3-206ENST00000588423 NABP2Q9BQ15 211 aa12.76□□□□□ -0.37
RETREG3-206ENST00000588423 ZNF251Q9BRH9 671 aa12.76□□□□□ -0.37
RETREG3-206ENST00000588423 FUNDC2Q9BWH2 189 aa12.76□□□□□ -0.37
RETREG3-206ENST00000588423 ZNF736B4DX44 427 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-206ENST00000588423 ST8SIA5O15466 376 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 FBXO24O75426 580 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 TGFBR1P36897 503 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 RPL5P46777 297 aaKnown RBP12.75□□□□□ -0.37
RETREG3-206ENST00000588423 PNLIPRP3Q17RR3 467 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 TMEM95Q3KNT9 176 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 ZNF260Q3ZCT1 412 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 TREML4Q6UXN2 200 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 OR5H6Q8NGV6 325 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 SLC25A38Q96DW6 304 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 MRPL20Q9BYC9 149 aaKnown RBP12.75□□□□□ -0.37
RETREG3-206ENST00000588423 PARP12Q9H0J9 701 aaKnown RBP12.75□□□□□ -0.37
RETREG3-206ENST00000588423 C11orf54Q9H0W9 315 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-206ENST00000588423 DCSTAMPQ9H295 470 aa12.75□□□□□ -0.37
RETREG3-206ENST00000588423 LIN7CQ9NUP9 197 aaKnown RBP12.75□□□□□ -0.37
RETREG3-206ENST00000588423 TRBV6-7A0A0A0MS04 114 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 GSTT2P0CG29 244 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 GSTT2BP0CG30 244 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 RPS19P39019 145 aaKnown RBP12.74□□□□□ -0.37
RETREG3-206ENST00000588423 OR3A3P47888 321 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 LSM3P62310 102 aaKnown RBP12.74□□□□□ -0.37
RETREG3-206ENST00000588423 Q8N9W7 124 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 OR10J5Q8NHC4 309 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 PHF21AQ96BD5 680 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 MMP27Q9H306 513 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 PLSCR3Q9NRY6 295 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 RDH8Q9NYR8 311 aa12.74□□□□□ -0.37
RETREG3-206ENST00000588423 ZNF230Q9UIE0 474 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-206ENST00000588423 ELF5Q9UKW6 265 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-206ENST00000588423 SH2D7A6NKC9 451 aaPredicted RBP12.73□□□□□ -0.37
RETREG3-206ENST00000588423 NCBP2LA6PVI3 153 aaKnown RBP12.73□□□□□ -0.37
RETREG3-206ENST00000588423 IGHG2P01859 326 aa12.73□□□□□ -0.37
RETREG3-206ENST00000588423 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
RETREG3-206ENST00000588423 C9orf152Q5JTZ5 239 aa12.73□□□□□ -0.37
RETREG3-206ENST00000588423 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
RETREG3-206ENST00000588423 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.73□□□□□ -0.37
RETREG3-206ENST00000588423 SLC25A46Q96AG3 418 aa12.73□□□□□ -0.37
RETREG3-206ENST00000588423 ABCG5Q9H222 651 aa12.73□□□□□ -0.37
RETREG3-206ENST00000588423 GAB2Q9UQC2 676 aa12.73□□□□□ -0.37
RETREG3-206ENST00000588423 TMEM235A6NFC5 223 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 OR5H14A6NHG9 310 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 BET1O15155 118 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 CSF1P09603 554 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 CD28P10747 220 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 MC5RP33032 325 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 GNG2P59768 71 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 RPL39P5Q59GN2 51 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 CENPVQ7Z7K6 275 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-206ENST00000588423 NDUFA11Q86Y39 141 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 ANKRD13BQ86YJ7 626 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 C11orf44Q8N8P7 122 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 OR5AU1Q8NGC0 362 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 MAFIPQ8WZ33 124 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 KCTD12Q96CX2 325 aaKnown RBP12.72□□□□□ -0.37
RETREG3-206ENST00000588423 ABHD14BQ96IU4 210 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 RASL11BQ9BPW5 248 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 DIABLOQ9NR28 239 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 ZNF221Q9UK13 617 aa12.72□□□□□ -0.37
RETREG3-206ENST00000588423 TRRAPQ9Y4A5 3859 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 CTXN2P0C2S0 81 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 CT45A6P0DMU7 189 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 CT45A5P0DMU8 189 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 CT45A7P0DMV0 189 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 F2RL1P55085 397 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 CD83Q01151 205 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 SLC35E3Q7Z769 313 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 OR5AN1Q8NGI8 311 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 CHPT1Q8WUD6 406 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 NUDCD2Q8WVJ2 157 aa12.71□□□□□ -0.37
RETREG3-206ENST00000588423 TRAV18A0A075B6X5 111 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 IGKV1D-8A0A087WSZ0 117 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 H0YJW9 148 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 KCNAB3O43448 404 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 SSX5O60225 188 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 PROP1O75360 226 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 GABARAPO95166 117 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 TSPAN15O95858 294 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 GPR12P47775 334 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 ACTBP60709 375 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 VBP1P61758 197 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 NCS1P62166 190 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 MMDQ15546 238 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 UBE2NLQ5JXB2 153 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 GPR141Q7Z602 305 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 FOXRED2Q8IWF2 684 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 H1FOOQ8IZA3 346 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-206ENST00000588423 NPBQ8NG41 125 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 OR4X2Q8NGF9 303 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 RNF5Q99942 180 aa12.7□□□□□ -0.38
RETREG3-206ENST00000588423 CITED2Q99967 270 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-206ENST00000588423 GINS4Q9BRT9 223 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms