RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 LPAR3Q9UBY5 353 aa13.67□□□□□ -0.22
NFIX-210ENST00000588228 ICE1Q9Y2F5 2266 aa13.67□□□□□ -0.22
NFIX-210ENST00000588228 ANKHD1Q8IWZ3 2542 aaKnown RBP13.67□□□□□ -0.22
NFIX-210ENST00000588228 TPRP12270 2363 aaKnown RBP13.67□□□□□ -0.22
NFIX-210ENST00000588228 C19orf84I3L1E1 186 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 K7EPK0 472 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 ATP6V1G1O75348 118 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 SCGB1D2O95969 90 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 SOD3P08294 240 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 DANCRP0C864 163 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 ZNF16P17020 682 aaPredicted RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 COL8A2P25067 703 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 EXOSC2Q13868 293 aaKnown RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 ZNF585BQ52M93 769 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 THOC7Q6I9Y2 204 aaKnown RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 FAM219AQ8IW50 185 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 FOXRED2Q8IWF2 684 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 FAM71E2Q8N5Q1 922 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 TCTEX1D1Q8N7M0 179 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 ABHD14BQ96IU4 210 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 HSD17B10Q99714 261 aaKnown RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 FAM212BQ9NTI7 297 aaPredicted RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 CTSZQ9UBR2 303 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 LSM5Q9Y4Y9 91 aaKnown RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 B8ZZF3 427 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 FCN3O75636 299 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 CFDP00746 253 aaPredicted RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 IGKV1-39P01597 117 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 IGKV1D-39P04432 117 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 SLC25A6P12236 298 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 GPR12P47775 334 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 RAB7AP51149 207 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 RPL31P62899 125 aaKnown RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 MRPS11P82912 194 aaKnown RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 OR10A7Q8NGE5 316 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 NEU4Q8WWR8 484 aaPredicted RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 LSM10Q969L4 123 aaKnown RBP13.66□□□□□ -0.22
NFIX-210ENST00000588228 GAL3ST2Q9H3Q3 398 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 C19orf12Q9NSK7 152 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 POMT1Q9Y6A1 747 aa13.66□□□□□ -0.22
NFIX-210ENST00000588228 RAI1Q7Z5J4 1906 aaPredicted RBP13.65□□□□□ -0.22
NFIX-210ENST00000588228 TANC2Q9HCD6 1990 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 ACACBO00763 2458 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 DSCAMO60469 2012 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 KALRNO60229 2985 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 NBASA2RRP1 2371 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 DVL1O14640 695 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 ST8SIA3O43173 380 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 RPL30P62888 115 aaKnown RBP13.65□□□□□ -0.22
NFIX-210ENST00000588228 Q3ZCU0 254 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 IFI27L2Q9H2X8 130 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 UBQLN2Q9UHD9 624 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 GAB2Q9UQC2 676 aa13.65□□□□□ -0.22
NFIX-210ENST00000588228 A0A1B0GU03 582 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 A0A1W2PPR1 153 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 MSGN1A6NI15 193 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 E5RGE8 158 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 LYNX1G3V0Z9 82 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 KCNAB3O43448 404 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 CLDN1O95832 211 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 IGHV2-70P01814 119 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 LYNX1P0DP58 116 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 HTR2BP41595 481 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 ZNF134P52741 427 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 UBA52P62987 128 aaKnown RBP13.64□□□□□ -0.23
NFIX-210ENST00000588228 ZNF273Q14593 569 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 TCTEX1D2Q8WW35 142 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 ARPC5LQ9BPX5 153 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 ABHD14AQ9BUJ0 271 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 RPUSD1Q9UJJ7 312 aaKnown RBP13.64□□□□□ -0.23
NFIX-210ENST00000588228 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
NFIX-210ENST00000588228 DIDO1Q9BTC0 2240 aaKnown RBP13.64□□□□□ -0.23
NFIX-210ENST00000588228 NKX2-1P43699 371 aaPredicted RBP13.63□□□□□ -0.23
NFIX-210ENST00000588228 BTNL3Q6UXE8 466 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 RNASE11Q8TAA1 199 aaKnown RBP13.63□□□□□ -0.23
NFIX-210ENST00000588228 GPR146Q96CH1 333 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 ZNF714Q96N38 554 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 PLEKHA2Q9HB19 425 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 KIAA2026Q5HYC2 2103 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 A0A0G2JRQ6 117 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 HKR1P10072 659 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 NFYBP25208 207 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 LPAR6P43657 344 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 AKR1C2P52895 323 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 CT45A1Q5HYN5 189 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 PRAMEF5Q5TYX0 476 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 TMEM200BQ69YZ2 307 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 SPAG16Q8N0X2 631 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.63□□□□□ -0.23
NFIX-210ENST00000588228 ZNF439Q8NDP4 499 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 CT45A3Q8NHU0 189 aa13.63□□□□□ -0.23
NFIX-210ENST00000588228 H1FXQ92522 213 aaKnown RBP13.63□□□□□ -0.23
NFIX-210ENST00000588228 BBC3Q96PG8 261 aaPredicted RBP13.63□□□□□ -0.23
NFIX-210ENST00000588228 ARFGEF3Q5TH69 2177 aa13.62□□□□□ -0.23
NFIX-210ENST00000588228 A6NNC1 897 aa13.62□□□□□ -0.23
NFIX-210ENST00000588228 F5H0A9 414 aaPredicted RBP13.62□□□□□ -0.23
NFIX-210ENST00000588228 SLC31A2O15432 143 aa13.62□□□□□ -0.23
NFIX-210ENST00000588228 PROP1O75360 226 aa13.62□□□□□ -0.23
NFIX-210ENST00000588228 PITX3O75364 302 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms