RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ECI1P42126 302 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 GNB1P62873 340 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 NDPQ00604 133 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 IRF3Q14653 427 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 ASPHD1Q5U4P2 390 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 LIN54Q6MZP7 749 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 TMEM65Q6PI78 240 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 ZNF491Q8N8L2 437 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 NPBQ8NG41 125 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 ABHD14BQ96IU4 210 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 GFI1Q99684 422 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 LPAR5Q9H1C0 372 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 PLEKHJ1Q9NW61 149 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 SCN3BQ9NY72 215 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 OR1A1Q9P1Q5 309 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 ZMAT5Q9UDW3 170 aaKnown RBP11.16□□□□□ -0.62
VMP1-206ENST00000587945 STEAP1Q9UHE8 339 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 AK3Q9UIJ7 227 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 I3L521 148 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 BPNT1O95861 308 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 IGLV1-40P01703 118 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 HSMCR30P0CW71 290 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 SNRPBP14678 240 aaKnown RBP11.15□□□□□ -0.62
VMP1-206ENST00000587945 AQP4P55087 323 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 RPS25P62851 125 aaKnown RBP11.15□□□□□ -0.62
VMP1-206ENST00000587945 ZNF260Q3ZCT1 412 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 OR6M1Q8NGM8 313 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 CASTOR1Q8WTX7 329 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 UFD1Q92890 307 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 UBE2E2Q96LR5 201 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 CHCHD6Q9BRQ6 235 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 FBXL15Q9H469 300 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 PIPOXQ9P0Z9 390 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 KIAA1456Q9P272 454 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 SLC23A1Q9UHI7 598 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 VSIG4Q9Y279 399 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 AK6Q9Y3D8 172 aaKnown RBP11.15□□□□□ -0.62
VMP1-206ENST00000587945 LSM4Q9Y4Z0 139 aaKnown RBP11.15□□□□□ -0.62
VMP1-206ENST00000587945 A3GALT2U3KPV4 340 aa11.15□□□□□ -0.62
VMP1-206ENST00000587945 H0YJW9 148 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 FCN1O00602 326 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 RAB29O14966 203 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 NDUFA3O95167 84 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 RAB9AP51151 201 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 DCTN2Q13561 401 aaKnown RBP11.14□□□□□ -0.63
VMP1-206ENST00000587945 ECSCRQ19T08 205 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 FAM71F2Q6NXP2 309 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 MINDY2Q8NBR6 621 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 NRG4Q8WWG1 115 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 ALX4Q9H161 411 aaPredicted RBP11.14□□□□□ -0.63
VMP1-206ENST00000587945 PLGRKTQ9HBL7 147 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 COL7A1Q02388 2944 aa11.14□□□□□ -0.63
VMP1-206ENST00000587945 A0A1W2PN81 502 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 RRHO14718 337 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 SOX15O60248 233 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 GSTP1P09211 210 aaKnown RBP11.13□□□□□ -0.63
VMP1-206ENST00000587945 SCTP09683 121 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 ARSBP15848 533 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 CHRNA7P36544 502 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 CEACAM6P40199 344 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 TMEM50BP56557 158 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 CLDN12P56749 244 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 LINC00205P59089 165 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 CX3CL1P78423 397 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 HLA-DRB3P79483 266 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 ZNF616Q08AN1 781 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 PLGLAQ15195 96 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 MOB1BQ7L9L4 216 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 FAM89BQ8N5H3 189 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
VMP1-206ENST00000587945 CLCC1Q96S66 551 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 AGMATQ9BSE5 352 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 URM1Q9BTM9 101 aaKnown RBP11.13□□□□□ -0.63
VMP1-206ENST00000587945 C11orf54Q9H0W9 315 aaPredicted RBP11.13□□□□□ -0.63
VMP1-206ENST00000587945 RNF150Q9ULK6 438 aa11.13□□□□□ -0.63
VMP1-206ENST00000587945 TRBV6-6A0A0A6YYG2 114 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 OR5H14A6NHG9 310 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 FOXI3A8MTJ6 420 aaPredicted RBP11.12□□□□□ -0.63
VMP1-206ENST00000587945 H7C2Y5 167 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 SLC17A2O00624 439 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 HSPA12AO43301 675 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 OR8U8P0C7N1 319 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 EGR2P11161 476 aaPredicted RBP11.12□□□□□ -0.63
VMP1-206ENST00000587945 MAP2K4P45985 399 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 VEGFCP49767 419 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 RUNX1Q01196 453 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 PLA2G7Q13093 441 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 TPBGQ13641 420 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 RAB11BQ15907 218 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 C19orf54Q5BKX5 351 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 ABHD5Q8WTS1 349 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 ARHGAP5-AS1Q96IT6 56 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 WWC2-AS2Q96NR7 200 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 ASCL2Q99929 193 aa11.12□□□□□ -0.63
VMP1-206ENST00000587945 FAM103A1Q9BTL3 118 aaKnown RBP11.12□□□□□ -0.63
VMP1-206ENST00000587945 CCDC90BQ9GZT6 254 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms