RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 EPPK1P58107 5090 aaKnown RBP11.12□□□□□ -0.63
SDF2-202ENST00000585428 SORL1Q92673 2214 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 LYSTQ99698 3801 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 IRGMA1A4Y4 181 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
SDF2-202ENST00000585428 LDLRAD4O15165 306 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 BAG2O95816 211 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 IGHV4-30-4P0DP06 118 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 MC5RP33032 325 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 DOC2BQ14184 412 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 HMGN3Q15651 99 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 ECSCRQ19T08 205 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 PYHIN1Q6K0P9 492 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 ZFP41Q8N8Y5 198 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 OR2AK2Q8NG84 335 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 FLYWCH2Q96CP2 140 aaKnown RBP11.11□□□□□ -0.63
SDF2-202ENST00000585428 TMEM80Q96HE8 168 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 DERL3Q96Q80 235 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 OR4C12Q96R67 309 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 RNF5Q99942 180 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 UQCC2Q9BRT2 126 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 AGMATQ9BSE5 352 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 PALMDQ9NP74 551 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 PIPOXQ9P0Z9 390 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 GHRLQ9UBU3 117 aa11.11□□□□□ -0.63
SDF2-202ENST00000585428 DYNC2H1Q8NCM8 4307 aaKnown RBP11.11□□□□□ -0.63
SDF2-202ENST00000585428 RAB29O14966 203 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 IGLV1-51P01701 117 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 CD1AP06126 327 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 MYL12AP19105 171 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 VEGFCP49767 419 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 LRRC36Q1X8D7 754 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 FAM131AQ6UXB0 335 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 PPP1R27Q86WC6 154 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 C10orf67Q8IYJ2 551 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 OR5AN1Q8NGI8 311 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 SULT4A1Q9BR01 284 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 FAAP24Q9BTP7 215 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 CNOT2Q9NZN8 540 aaKnown RBP11.1□□□□□ -0.63
SDF2-202ENST00000585428 RNF150Q9ULK6 438 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 GAB2Q9UQC2 676 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 CSMD3Q7Z407 3707 aa11.1□□□□□ -0.63
SDF2-202ENST00000585428 SACSQ9NZJ4 4579 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 H0YJW9 148 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 DYNC1I1O14576 645 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 PROP1O75360 226 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 IGHV3-11P01762 117 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 SNRPBP14678 240 aaKnown RBP11.09□□□□□ -0.63
SDF2-202ENST00000585428 PITPNAQ00169 270 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 SRSF7Q16629 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
SDF2-202ENST00000585428 ACTBL2Q562R1 376 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 RPL39P5Q59GN2 51 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 ZFAND6Q6FIF0 208 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 ZNF880Q6PDB4 577 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 ZNF555Q8NEP9 628 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 LFNGQ8NES3 379 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 GGHQ92820 318 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 FAM46BQ96A09 425 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 MS4A10Q96PG2 267 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 SLA2Q9H6Q3 261 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 S100A14Q9HCY8 104 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 STEAP1Q9UHE8 339 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 SLC23A1Q9UHI7 598 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 A3GALT2U3KPV4 340 aa11.09□□□□□ -0.63
SDF2-202ENST00000585428 OR5H14A6NHG9 310 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 ITGB1BP1O14713 200 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 ST8SIA5O15466 376 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 HSPA12AO43301 675 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 RBBP9O75884 186 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 NAPSAO96009 420 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 KLF5Q13887 457 aaPredicted RBP11.08□□□□□ -0.64
SDF2-202ENST00000585428 PSG5Q15238 335 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 UNQ5815/PRO19632Q6UWF5 114 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 IL34Q6ZMJ4 242 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 NKAIN3Q8N8D7 197 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 NEDD4LQ96PU5 975 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 FAM103A1Q9BTL3 118 aaKnown RBP11.08□□□□□ -0.64
SDF2-202ENST00000585428 ELOVL1Q9BW60 279 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 SMPD3Q9NY59 655 aaPredicted RBP11.08□□□□□ -0.64
SDF2-202ENST00000585428 ABRACLQ9P1F3 81 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 STUB1Q9UNE7 303 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 BIRC6Q9NR09 4857 aa11.08□□□□□ -0.64
SDF2-202ENST00000585428 TFAP2AP05549 437 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 GSTP1P09211 210 aaKnown RBP11.07□□□□□ -0.64
SDF2-202ENST00000585428 CD37P11049 281 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 HTR2CP28335 458 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 ST3GAL4Q11206 333 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 MED21Q13503 144 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 PLGLAQ15195 96 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 GLDNQ6ZMI3 551 aaPredicted RBP11.07□□□□□ -0.64
SDF2-202ENST00000585428 C6orf201Q7Z4U5 140 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 HAPLN4Q86UW8 402 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 PQLC1Q8N2U9 271 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 IL1F10Q8WWZ1 152 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 ABHD14BQ96IU4 210 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 CLCC1Q96S66 551 aa11.07□□□□□ -0.64
SDF2-202ENST00000585428 PARP12Q9H0J9 701 aaKnown RBP11.07□□□□□ -0.64
SDF2-202ENST00000585428 RANGRFQ9HD47 186 aaPredicted RBP11.07□□□□□ -0.64
SDF2-202ENST00000585428 WASHC3Q9Y3C0 194 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms