RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 RNF5Q99942 180 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 MED18Q9BUE0 208 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 RSPO3Q9BXY4 272 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 NMNAT1Q9HAN9 279 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 PROK2Q9HC23 129 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 FGF20Q9NP95 211 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CTPS2Q9NRF8 586 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CKLFQ9UBR5 152 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 AP4S1Q9Y587 144 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 V9GYQ6 96 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 NOTCH2Q04721 2471 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 CREBBPQ92793 2442 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 F5P12259 2224 aa1.52□□□□□ -2.17
SMCHD1-211ENST00000584897 KMT2CQ8NEZ4 4911 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SPTA1P02549 2419 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CLDN34H7C241 214 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 M0R1W7 72 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 EFNA2O43921 213 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC16A7O60669 478 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 GCM2O75603 506 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ARL6IP5O75915 188 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ARG1P05089 322 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CRYGBP07316 175 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CTXN2P0C2S0 81 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OCMP0CE72 109 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 PGA4P0DJD7 388 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 PGA3P0DJD8 388 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 IFI30P13284 250 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MYL12AP19105 171 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CCL1P22362 96 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MYL9P24844 172 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 GRPRP30550 384 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SERPINB10P48595 397 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DNASE1L1P49184 302 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF136P52737 540 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CD300CQ08708 224 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 APOFQ13790 326 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ATP6V1FQ16864 119 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 NHLRC3Q5JS37 347 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 C1orf146Q5VVC0 180 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 KCTD16Q68DU8 428 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CYB5R2Q6BCY4 276 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF620Q6ZNG0 422 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC36A1Q7Z2H8 476 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2W3Q7Z3T1 314 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MARCH3Q86UD3 253 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 FUNDC1Q8IVP5 155 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 LINC01561Q8N1V8 128 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 Q8NBF4 154 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR10G2Q8NGC3 310 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR5A2Q8NGI9 324 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SYNPRQ8TBG9 265 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF184Q99676 751 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SAV1Q9H4B6 383 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SDHAF2Q9NX18 166 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TBL2Q9Y4P3 447 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 URB1O60287 2271 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CELSR1Q9NYQ6 3014 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 NCOA6Q14686 2063 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 F8P00451 2351 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ARHGAP21Q5T5U3 1957 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV3OR16-12A0A075B7B8 117 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A0J9YW62 118 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1W2PRF3 423 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1W2PRM7 423 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 RPL37AP8A6NKH3 93 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 G3V2T6 193 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 M0R233 179 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TNFSF11O14788 317 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 AGPAT2O15120 278 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TRAF3IP2O43734 574 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CD5LO43866 347 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CTAG2O75638 210 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 RBBP9O75884 186 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TNFSF13O75888 250 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 C1QCP02747 245 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 GATA1P15976 413 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SRMP19623 302 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 HTR2CP28335 458 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 S100GP29377 79 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 FABP6P51161 128 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DYNLT3P51808 116 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CRISP1P54107 249 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 FOXA1P55317 472 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 RAB25P57735 213 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 UBE2MP61081 183 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 NUTF2P61970 127 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 PITPNAQ00169 270 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TPBGQ13641 420 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 GINS1Q14691 196 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 VAMP3Q15836 100 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MPV17LQ2QL34 196 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MINOS1Q5TGZ0 78 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SPINK14Q6IE38 97 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 FAM53AQ6NSI3 398 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 S100A7AQ86SG5 101 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC22A24Q8N4F4 322 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 C2orf73Q8N5S3 287 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DUSP18Q8NEJ0 188 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms