RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 RBKSQ9H477 322 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 TMSB15BA0A087X1C1 80 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 ZNF645Q8N7E2 425 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 TMEM52Q8NDY8 209 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 WNT2BQ93097 391 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
RNF43-208ENST00000584437 RARRES2Q99969 163 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 DTX4Q9Y2E6 619 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 LOC389332A0A1B0GUA5 103 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 A0A1B0GV90 55 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 SOD3P08294 240 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 WDR31Q8NA23 367 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 TRBV23-1A0A0A0MS06 115 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 DHRS7CA6NNS2 312 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 PIN1P1O15428 100 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 C1QCP02747 245 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 CCL3P10147 92 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 ZNF362Q5T0B9 420 aaPredicted RBP11.3□□□□□ -0.6
RNF43-208ENST00000584437 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 LAIR2Q6ISS4 152 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 SELENOHQ8IZQ5 122 aaKnown RBP11.3□□□□□ -0.6
RNF43-208ENST00000584437 C5orf66Q9H5L9 145 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 IL36RNQ9UBH0 155 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 WNT16Q9UBV4 365 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 SPAG17Q6Q759 2223 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 TMEM250H0YL14 139 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 MGST3O14880 152 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 PRF1P14222 555 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 PEBP1P30086 187 aaKnown RBP11.3□□□□□ -0.6
RNF43-208ENST00000584437 FBXW9Q5XUX1 488 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 POC1AQ8NBT0 407 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 IGLV1-36A0A0B4J1U3 117 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 CEACAM18A8MTB9 384 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 FOXS1O43638 330 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
RNF43-208ENST00000584437 IZUMO4Q1ZYL8 232 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 ZNF502Q8TBZ5 544 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 FAM216AQ8WUB2 273 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 SPSB4Q96A44 273 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 GPR146Q96CH1 333 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 TCFL5Q9UL49 500 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 A8MXK9 166 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 CD3EP07766 207 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 WDR54Q9H977 334 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 LOC107984156A0A0G2JMH3 177 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 CRXO43186 299 aaPredicted RBP11.3□□□□□ -0.6
RNF43-208ENST00000584437 VENTXO95231 258 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 UCP3P55916 312 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 Q5BKY6 102 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 ARL17AQ8IVW1 177 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 ZNF385AQ96PM9 386 aaKnown RBP11.3□□□□□ -0.6
RNF43-208ENST00000584437 SOSTQ9BQB4 213 aa11.3□□□□□ -0.6
RNF43-208ENST00000584437 EML2O95834 649 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 LINC00869P0C866 280 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 CKS2P33552 79 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 FUT5Q11128 374 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 EIF4EBP2Q13542 120 aaPredicted RBP11.29□□□□□ -0.6
RNF43-208ENST00000584437 HIKESHIQ53FT3 197 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 ZNF506Q5JVG8 444 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 GCSAMQ8N6F7 178 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 CT55Q8WUE5 264 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 PSMG3Q9BT73 122 aaPredicted RBP11.29□□□□□ -0.6
RNF43-208ENST00000584437 ERGP11308 486 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 PRDX2P32119 198 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 MAS1LP35410 378 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 KCNK17Q96T54 332 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 A0A1W2PP11 408 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 K7N7A8 449 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 SRIP30626 198 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 DNLZQ5SXM8 178 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 CALHM1Q8IU99 346 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 RPP25Q9BUL9 199 aaKnown RBP11.29□□□□□ -0.6
RNF43-208ENST00000584437 F2RL2O00254 374 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 RNF224P0DH78 156 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 TAS2R60P59551 318 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 RPS20P60866 119 aaKnown RBP11.29□□□□□ -0.6
RNF43-208ENST00000584437 COL10A1Q03692 680 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 GUCD1Q96NT3 240 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 AMELYQ99218 206 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 PARLQ9H300 379 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 HSPB7Q9UBY9 170 aa11.29□□□□□ -0.6
RNF43-208ENST00000584437 SCTP09683 121 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 MAGEA5P43359 124 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 SRSF5Q13243 272 aaKnown RBP11.28□□□□□ -0.6
RNF43-208ENST00000584437 OR10AG1Q8NH19 301 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 SMIM8Q96KF7 97 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 SDHCQ99643 169 aaPredicted RBP11.28□□□□□ -0.6
RNF43-208ENST00000584437 SPOCK3Q9BQ16 436 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 SFXN3Q9BWM7 321 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 OR2J1Q9GZK6 312 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 SPINK2P20155 84 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 AMMECR1LQ6DCA0 310 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 FGFRL1Q8N441 504 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 DLL1O00548 723 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 CLDN14O95500 239 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 PSG4Q00888 419 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms