RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ELF5Q9UKW6 265 aaPredicted RBP10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 IGKV1-6A0A0C4DH72 117 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 TMEM235A6NFC5 223 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 RAB29O14966 203 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 FGF16O43320 207 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 FBXO24O75426 580 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 GSTP1P09211 210 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 GSTT2P0CG29 244 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 GSTT2BP0CG30 244 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 RPS19P39019 145 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 SERPINB10P48595 397 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 GNG2P59768 71 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 IGSF11Q5DX21 431 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 HACD4Q5VWC8 232 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 TREML4Q6UXN2 200 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 CENPVQ7Z7K6 275 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 OR13F1Q8NGS4 319 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 RBMXL1Q96E39 390 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 NABP2Q9BQ15 211 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 WNT10AQ9GZT5 417 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 C11orf54Q9H0W9 315 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 RDH8Q9NYR8 311 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 RNF150Q9ULK6 438 aa10.02□□□□□ -0.81
SMARCE1-218ENST00000582955 ITGB1BP1O14713 200 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 TMEM127O75204 238 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 CD28P10747 220 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 DTYMKP23919 212 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 VBP1P61758 197 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 NCS1P62166 190 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 C2orf68Q2NKX9 166 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 ZNF260Q3ZCT1 412 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 RPL39P5Q59GN2 51 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 FAM71F2Q6NXP2 309 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 Q8N6K4 173 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 OR10J5Q8NHC4 309 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 NUDCD2Q8WVJ2 157 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 GINS4Q9BRT9 223 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 CABLES2Q9BTV7 478 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 ST6GALNAC5Q9BVH7 336 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 MRPS26Q9BYN8 205 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 ZNF221Q9UK13 617 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 SPATA2Q9UM82 520 aa10.01□□□□□ -0.81
SMARCE1-218ENST00000582955 TET2Q6N021 2002 aaPredicted RBP10□□□□□ -0.81
SMARCE1-218ENST00000582955 TRRAPQ9Y4A5 3859 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 TRAV18A0A075B6X5 111 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 TSPAN15O95858 294 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 CSF1P09603 554 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 GPR12P47775 334 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 PITPNAQ00169 270 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 SRSF7Q16629 238 aaKnown RBP eCLIP10□□□□□ -0.81
SMARCE1-218ENST00000582955 PNLIPRP3Q17RR3 467 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 SLC35E3Q7Z769 313 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 Q8N9W7 124 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 OR5AU1Q8NGC0 362 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 OR8H1Q8NGG4 311 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 RASL11BQ9BPW5 248 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 AGMATQ9BSE5 352 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 GHITMQ9H3K2 345 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 DIABLOQ9NR28 239 aa10□□□□□ -0.81
SMARCE1-218ENST00000582955 IGKV1D-8A0A087WSZ0 117 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 TRBV6-7A0A0A0MS04 114 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 A0A0A6YYH2 397 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 A6NJ64 397 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 OR8U9P0C7N5 309 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 F2RL1P55085 397 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 ACTBP60709 375 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 MMDQ15546 238 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 NSUN5P1Q3KNT7 163 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 FAM131AQ6UXB0 335 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 GLDNQ6ZMI3 551 aaPredicted RBP9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 Q6ZS49 121 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 OR8U1Q8NH10 309 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 WIPF2Q8TF74 440 aaPredicted RBP9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 SLC25A46Q96AG3 418 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 CITED2Q99967 270 aaPredicted RBP9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 ZNF251Q9BRH9 671 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 PLSCR3Q9NRY6 295 aa9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 LIN7CQ9NUP9 197 aaKnown RBP9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 RBM7Q9Y580 266 aaKnown RBP9.99□□□□□ -0.81
SMARCE1-218ENST00000582955 H7C2Y5 167 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 SSX5O60225 188 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 DIRAS3O95661 229 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 CT45A6P0DMU7 189 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 CT45A5P0DMU8 189 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 CT45A7P0DMV0 189 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 UBE2NLQ5JXB2 153 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 GPR107Q5VW38 600 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 GPR141Q7Z602 305 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 ANKRD13BQ86YJ7 626 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 FOXRED2Q8IWF2 684 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 SAMD12Q8N8I0 201 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 DRAXINQ8NBI3 349 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 OR4X2Q8NGF9 303 aa9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 FAM110DQ8TAY7 271 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 S100A16Q96FQ6 103 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 NOL4LQ96MY1 436 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 NAA50Q9GZZ1 169 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-218ENST00000582955 TOLLIPQ9H0E2 274 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms