RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 PITX3O75364 302 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 CD55P08174 381 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 CD80P33681 288 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 CAV2P51636 162 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 SPRNQ5BIV9 151 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 CXorf66Q5JRM2 361 aaPredicted RBP18.88■□□□□ 0.61
CCDC47-204ENST00000582252 UQCC3Q6UW78 93 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 MYO18BQ8IUG5 2567 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 ZNF705EA8MWA4 302 aaPredicted RBP18.88■□□□□ 0.61
CCDC47-204ENST00000582252 OR4A8P0C604 315 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 EPHA1P21709 976 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 PPP1CCP36873 323 aaKnown RBP18.88■□□□□ 0.61
CCDC47-204ENST00000582252 SULT1A2P50226 295 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 BAXQ07812 192 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 ADIPOQQ15848 244 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 ZNF66Q6ZN08 573 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 ZNF843Q8N446 348 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 C14orf79Q96F83 325 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 SDSLQ96GA7 329 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 ARV1Q9H2C2 271 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 ESRP2Q9H6T0 727 aaKnown RBP18.88■□□□□ 0.61
CCDC47-204ENST00000582252 KCNJ16Q9NPI9 418 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 HCFC1P51610 2035 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 LRRC30A6NM36 301 aa18.87■□□□□ 0.61
CCDC47-204ENST00000582252 PRB1P04280 392 aa18.87■□□□□ 0.61
CCDC47-204ENST00000582252 FAM157CP0CG43 387 aa18.87■□□□□ 0.61
CCDC47-204ENST00000582252 MUC1P15941 1255 aaPredicted RBP18.87■□□□□ 0.61
CCDC47-204ENST00000582252 BLOC1S1P78537 153 aa18.87■□□□□ 0.61
CCDC47-204ENST00000582252 ZNF266Q14584 549 aa18.87■□□□□ 0.61
CCDC47-204ENST00000582252 RAB40CQ96S21 281 aa18.87■□□□□ 0.61
CCDC47-204ENST00000582252 EGLN1Q9GZT9 426 aa18.87■□□□□ 0.61
CCDC47-204ENST00000582252 FAM234AQ9H0X4 552 aa18.87■□□□□ 0.61
CCDC47-204ENST00000582252 NUP50Q9UKX7 468 aa18.87■□□□□ 0.61
CCDC47-204ENST00000582252 C17orf100A8MU93 164 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 TEX46H3BTG2 121 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 IGKV1-39P01597 117 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 IGKV1D-39P04432 117 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 RPL23AP62750 156 aaKnown RBP18.86■□□□□ 0.61
CCDC47-204ENST00000582252 ZNF585BQ52M93 769 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 STUMQ69YW2 141 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 OR1S2Q8NGQ3 325 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 HSD17B10Q99714 261 aaKnown RBP18.86■□□□□ 0.61
CCDC47-204ENST00000582252 MAGT1Q9H0U3 335 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 ZNF665Q9H7R5 613 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 RNF150Q9ULK6 438 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 LAMP3Q9UQV4 416 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 FAM24AA6NFZ4 105 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 SEC11BP0C7V7 166 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 AGAP20933 346 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 EDDM3BP56851 147 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 ZNRF1Q8ND25 227 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 SMIM8Q96KF7 97 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 WFIKKN1Q96NZ8 548 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 GINS3Q9BRX5 216 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 GNG12Q9UBI6 72 aa18.86■□□□□ 0.61
CCDC47-204ENST00000582252 CHD6Q8TD26 2715 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 A0A0G2JRQ6 117 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 YPEL1O60688 119 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 LPAR6P43657 344 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 NHLH2Q02577 135 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 EIF4EBP1Q13541 118 aaPredicted RBP18.85■□□□□ 0.61
CCDC47-204ENST00000582252 FAM209AQ5JX71 171 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 IL34Q6ZMJ4 242 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 ZNF808Q8N4W9 903 aaPredicted RBP18.85■□□□□ 0.61
CCDC47-204ENST00000582252 RFESDQ8TAC1 157 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 LINC00052Q96N35 136 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 YPEL2Q96QA6 119 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 MMP26Q9NRE1 261 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 CACNG5Q9UF02 275 aa18.85■□□□□ 0.61
CCDC47-204ENST00000582252 F2RL2O00254 374 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 CHST1O43916 411 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 FBXO24O75426 580 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 CYB5R3P00387 301 aaPredicted RBP18.84■□□□□ 0.61
CCDC47-204ENST00000582252 SWI5Q1ZZU3 235 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 TEX36Q5VZQ5 186 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 STPG2Q8N412 459 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 TMEM252Q8N6L7 170 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 TCTEX1D2Q8WW35 142 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 COA4Q9NYJ1 87 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 RNF115Q9Y4L5 304 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 MMP24Q9Y5R2 645 aa18.84■□□□□ 0.61
CCDC47-204ENST00000582252 IGHV3-43A0A0B4J1X8 118 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 IGSF23A1L1A6 192 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 NKX6-3A6NJ46 265 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 FAM90A26D6RGX4 464 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 MED6O75586 246 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 CLDN1O95832 211 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 IGKV1-5P01602 117 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 IGHV3-43DP0DP04 118 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 ADAM5Q6NVV9 412 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 CLEC9AQ6UXN8 241 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 C1orf87Q8N0U7 546 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 PSG11Q9UQ72 335 aa18.83■□□□□ 0.61
CCDC47-204ENST00000582252 C1QL1O75973 258 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 GPR12P47775 334 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 CDSNQ15517 529 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 NCMAPQ5T1S8 102 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 STX12Q86Y82 276 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 CD300LFQ8TDQ1 290 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 BSCL2Q96G97 398 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms