RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 RPS11P62280 158 aaKnown RBP eCLIP12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 EML2O95834 649 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 CD82P27701 267 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 AMMECR1LQ6DCA0 310 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 OR11H4Q8NGC9 324 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 PGLYRP4Q96LB8 373 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 NUP205Q92621 2012 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 SCN4AP35499 1836 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A10PA6NDY2 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A18PA6NE21 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A16PA6NEW6 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A20PA6NIJ5 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A8PA6NJQ4 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A7PA6NKC0 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A22PA8MWA6 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A12PA8MX19 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A5PA8MXJ8 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A23PA8MXZ1 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 K7N7A8 449 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 LEPROTL1O95214 131 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A15PP0C7V4 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A13PP0C7W8 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A14PP0C7W9 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM90A24PP0C7X0 464 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 RND3P61587 244 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 FOXC1Q12948 553 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 GCSAMQ8N6F7 178 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 GPR146Q96CH1 333 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 MIA3Q5JRA6 1907 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 A0A1W2PPE3 182 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 C1orf100Q5SVJ3 147 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 PQLC2Q6ZP29 291 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 DEFB123Q8N688 67 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 NPDC1Q9NQX5 325 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 A0A1B0GV90 55 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 CDK2AP1O14519 115 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 C1QL1O75973 258 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 COX6CP09669 75 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 SCTP09683 121 aa12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 ZNF385AQ96PM9 386 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-217ENST00000581241 NPIPB9F8W1W9 429 aa12.58□□□□□ -0.39
CSNK1D-217ENST00000581241 TRGC1P0CF51 173 aa12.58□□□□□ -0.39
CSNK1D-217ENST00000581241 H2BFSP57053 126 aa12.58□□□□□ -0.39
CSNK1D-217ENST00000581241 FAM27BQ5VT28 67 aa12.58□□□□□ -0.39
CSNK1D-217ENST00000581241 CLDN14O95500 239 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 AGAP20933 346 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 MAS1LP35410 378 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 FBXW9Q5XUX1 488 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 CKS2P33552 79 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 ROM1Q03395 351 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 RTP5Q14D33 572 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 C1orf174Q8IYL3 243 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 HIST1H4GQ99525 98 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 LOC107984156A0A0G2JMH3 177 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 FAM90A26D6RGX4 464 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 UPK3AO75631 287 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 ARL17AQ8IVW1 177 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 RND1Q92730 232 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 SCNM1Q9BWG6 230 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 TNFRSF19Q9NS68 423 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 KCNE5Q9UJ90 142 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 IGHV5-10-1A0A0J9YXX1 117 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 PSG4Q00888 419 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 MAP1LC3AQ9H492 121 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 WDR54Q9H977 334 aa12.58□□□□□ -0.4
CSNK1D-217ENST00000581241 CXorf66Q5JRM2 361 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 CBLN4Q9NTU7 201 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 GLI3P10071 1580 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 ZNF324O75467 553 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 OR2H2O95918 312 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 HOXD4P09016 255 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 ID4P47928 161 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 FUT5Q11128 374 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 UNQ9370/PRO34162Q6UXP9 181 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 TMUB1Q9BVT8 246 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 PARLQ9H300 379 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 FOXS1O43638 330 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 SOD3P08294 240 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 ARL14EPLP0DKL9 152 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 HTN1P15515 57 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 QTRT1Q9BXR0 403 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 HSPB7Q9UBY9 170 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 SF3B6Q9Y3B4 125 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 QSER1Q2KHR3 1735 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 C21orf140B9A014 251 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 RPS20P60866 119 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 ZNF714Q96N38 554 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 C5orf66Q9H5L9 145 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 SCGB1A1P11684 91 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 GUCD1Q96NT3 240 aa12.57□□□□□ -0.4
CSNK1D-217ENST00000581241 MARF1Q9Y4F3 1742 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 REG1BP48304 166 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 TMEM183AQ8IXX5 376 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 MTURNQ8N3F0 131 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 H7C2G1 150 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 LMX1BO60663 402 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 RECKO95980 971 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms