RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 SCAF4O95104 1147 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 S1PR2O95136 353 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CLDN14O95500 239 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CLDN1O95832 211 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 IGHV3-13P01766 116 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HSPB1P04792 205 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CRYBA1P05813 215 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ADH4P08319 380 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 OR13C7P0DN81 318 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CFHR2P36980 270 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 UBE2KP61086 200 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HTD2P86397 168 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HOXA4Q00056 320 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TNFRSF9Q07011 255 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ZNF816Q0VGE8 651 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ICAM4Q14773 271 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ATP6V1FQ16864 119 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 MSMPQ1L6U9 139 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SOHLH1Q5JUK2 328 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 FAM53AQ6NSI3 398 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ZNF474Q6S9Z5 364 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TMEM14EPQ6UXP3 125 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 LILRB2Q8N423 598 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 OR2Z1Q8NG97 314 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CD300LFQ8TDQ1 290 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 C14orf79Q96F83 325 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SNX22Q96L94 193 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CLCC1Q96S66 551 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RARRES2Q99969 163 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 EGLN1Q9GZT9 426 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SAV1Q9H4B6 383 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ESRP2Q9H6T0 727 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HSPB7Q9UBY9 170 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 LAMP3Q9UQV4 416 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PRELID1Q9Y255 219 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 FAM215AQ9Y5M1 114 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 KLF2Q9Y5W3 355 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 DOCK7Q96N67 2140 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 IGKV1D-17A0A075B6S4 117 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 IGHV3-43A0A0B4J1X8 118 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 LOC102723971A0A1B0GUV8 181 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ODAMA1E959 279 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 MEX3AA1L020 520 aaKnown RBP7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PCNX2A6NKB5 2137 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 LRRC30A6NM36 301 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 MGST3O14880 152 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RAMP3O60896 148 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ZNF737O75373 536 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CRYAAP02489 173 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 IGHV3-43DP0DP04 118 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SSTR5P35346 364 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 G6PCP35575 357 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TIMP3P35625 211 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 GLRXP35754 106 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 AKR1C3P42330 323 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RAB13P51153 203 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 KLF3P57682 345 aaPredicted RBP7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 NKX6-1P78426 367 aaPredicted RBP7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SLC38A11Q08AI6 406 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TCF15Q12870 199 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HAGHQ16775 308 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 Q3ZCU0 254 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 KHDC3LQ587J8 217 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TMEM41BQ5BJD5 291 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 OR2B11Q5JQS5 317 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SPANXN5Q5MJ07 72 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ETV3LQ6ZN32 361 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 LRP11Q86VZ4 500 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RBMXL3Q8N7X1 1067 aaKnown RBP7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PRSS33Q8NF86 280 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CLDND2Q8NHS1 167 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SFT2D1Q8WV19 159 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 MBD3L1Q8WWY6 194 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 EDARADDQ8WWZ3 215 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HIST1H2BAQ96A08 127 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 S100PBPQ96BU1 408 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 MEGF10Q96KG7 1140 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 OR4C12Q96R67 309 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HSD17B10Q99714 261 aaKnown RBP7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SFXN3Q9BWM7 321 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 WDR61Q9GZS3 305 aaKnown RBP7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 BIN3Q9NQY0 253 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 JPT1Q9UK76 154 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PSG11Q9UQ72 335 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TIMM9Q9Y5J7 89 aa7.8□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ST8SIA5O15466 376 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 MT-ND4LP03901 98 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CEACAM8P31997 349 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RAB5BP61020 215 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RPS23P62266 143 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SERF2P84101 59 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 EDDM3AQ14507 147 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CR1LQ2VPA4 569 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RNF212Q495C1 297 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ZNF787Q6DD87 383 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 BTNL3Q6UXE8 466 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 H2BFWTQ7Z2G1 175 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 GCSAMQ8N6F7 178 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TPRX1Q8N7U7 411 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms