RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 C12orf54Q6X4T0 127 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 TGIF2LXQ8IUE1 241 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 SNX29P2Q8IUI4 249 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 LAX1Q8IWV1 398 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 ACOT12Q8WYK0 555 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 ZNF251Q9BRH9 671 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 SLC25A33Q9BSK2 321 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 MRPS7Q9Y2R9 242 aaKnown RBP17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 FAM90A9PA6NNJ1 464 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 CTDSP2O14595 271 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 HLA-DQB1P01920 261 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 LY6G6FQ5SQ64 297 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 GLDNQ6ZMI3 551 aaPredicted RBP17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 Q6ZS49 121 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 ZNF833PQ6ZTB9 187 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 SNAPC3Q92966 411 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 BCL7BQ9BQE9 202 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 AGMATQ9BSE5 352 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 ZNF702PQ9H963 129 aa17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 CCDC59Q9P031 241 aaKnown RBP17.34■□□□□ 0.37
CDC42EP4-203ENST00000578516 POM121CA8CG34 1229 aa17.33■□□□□ 0.36
CDC42EP4-203ENST00000578516 LANCL1O43813 399 aa17.33■□□□□ 0.36
CDC42EP4-203ENST00000578516 PROP1O75360 226 aa17.33■□□□□ 0.36
CDC42EP4-203ENST00000578516 BLCAPP62952 87 aa17.33■□□□□ 0.36
CDC42EP4-203ENST00000578516 PITPNAQ00169 270 aa17.33■□□□□ 0.36
CDC42EP4-203ENST00000578516 LINC01006Q8NI28 216 aa17.33■□□□□ 0.36
CDC42EP4-203ENST00000578516 NABP2Q9BQ15 211 aa17.33■□□□□ 0.36
CDC42EP4-203ENST00000578516 AMY1AP04745 511 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 AMY2AP04746 511 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 OR8U9P0C7N5 309 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 TMEM11P17152 192 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 NFYAP23511 347 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 COMPP49747 757 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 ARHGDIBP52566 201 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 KRTAP10-3P60369 221 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 FOXL1Q12952 345 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 LSAMPQ13449 338 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 MZT2AQ6P582 158 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 H1FOOQ8IZA3 346 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 DRAXINQ8NBI3 349 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 BEST4Q8NFU0 473 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 OR8U1Q8NH10 309 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 OR4F5Q8NH21 305 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 OR10J5Q8NHC4 309 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 AP3S1Q92572 193 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 GINS4Q9BRT9 223 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 DCUN1D5Q9BTE7 237 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 EXTL2Q9UBQ6 330 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 ANXA10Q9UJ72 324 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 PITPNC1Q9UKF7 332 aa17.32■□□□□ 0.36
CDC42EP4-203ENST00000578516 TENM1Q9UKZ4 2725 aa17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 TSPAN9O75954 239 aa17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 SOX6P35712 828 aa17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 RPL15P61313 204 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 SRSF7Q16629 238 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 LIAT1Q6ZQX7 453 aa17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 HOGA1Q86XE5 327 aa17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 OR4C13Q8NGP0 309 aa17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 SPATA3Q8NHX4 192 aa17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 EAF1Q96JC9 268 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 RBM14Q96PK6 669 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 SLIRPQ9GZT3 109 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 OR2D2Q9H210 308 aa17.31■□□□□ 0.36
CDC42EP4-203ENST00000578516 HAX1O00165 279 aa17.3■□□□□ 0.36
CDC42EP4-203ENST00000578516 RGS5O15539 181 aa17.3■□□□□ 0.36
CDC42EP4-203ENST00000578516 OR2F2O95006 317 aa17.3■□□□□ 0.36
CDC42EP4-203ENST00000578516 FAM131AQ6UXB0 335 aa17.3■□□□□ 0.36
CDC42EP4-203ENST00000578516 EDARADDQ8WWZ3 215 aa17.3■□□□□ 0.36
CDC42EP4-203ENST00000578516 RITA1Q96K30 269 aa17.3■□□□□ 0.36
CDC42EP4-203ENST00000578516 NPFFR1Q9GZQ6 430 aa17.3■□□□□ 0.36
CDC42EP4-203ENST00000578516 TOLLIPQ9H0E2 274 aa17.3■□□□□ 0.36
CDC42EP4-203ENST00000578516 IGKV1D-13A0A0B4J2D9 117 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 CLPSL1A2RUU4 121 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 ITGB1BP1O14713 200 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 IGKV1-13P0DP09 117 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 CNTFRP26992 372 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 GPR12P47775 334 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 FOXB2Q5VYV0 432 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 CNIH2Q6PI25 160 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 Q8N6K4 173 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 WFDC12Q8WWY7 111 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 CMTM3Q96MX0 182 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 C16orf95Q9H693 158 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 RAB18Q9NP72 206 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 IFT46Q9NQC8 304 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 RSL24D1Q9UHA3 163 aaKnown RBP17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 ANAPC10Q9UM13 185 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 RNF114Q9Y508 228 aa17.29■□□□□ 0.36
CDC42EP4-203ENST00000578516 RAB29O14966 203 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 FAM106CPP0CH98 169 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 CT45A6P0DMU7 189 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 CT45A5P0DMU8 189 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 CT45A7P0DMV0 189 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 PROK1P58294 105 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 ARPC4P59998 168 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 ABCA11PQ4W5N1 156 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 THNSL2Q86YJ6 484 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 C3orf56Q8N813 242 aa17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 C6orf62Q9GZU0 229 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP4-203ENST00000578516 BEX1Q9HBH7 125 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms