RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 RITA1Q96K30 269 aa18.07■□□□□ 0.48
VAPA-205ENST00000578314 CMSS1Q9BQ75 279 aaKnown RBP18.07■□□□□ 0.48
VAPA-205ENST00000578314 SCTP09683 121 aa18.06■□□□□ 0.48
VAPA-205ENST00000578314 RAB3BP20337 219 aa18.06■□□□□ 0.48
VAPA-205ENST00000578314 SLC6A1P30531 599 aa18.06■□□□□ 0.48
VAPA-205ENST00000578314 ACTBP60709 375 aa18.06■□□□□ 0.48
VAPA-205ENST00000578314 C22orf42Q6IC83 251 aa18.06■□□□□ 0.48
VAPA-205ENST00000578314 FCGR1BQ92637 280 aa18.06■□□□□ 0.48
VAPA-205ENST00000578314 HSPB9Q9BQS6 159 aa18.06■□□□□ 0.48
VAPA-205ENST00000578314 PARP12Q9H0J9 701 aaKnown RBP18.06■□□□□ 0.48
VAPA-205ENST00000578314 ZNF580Q9UK33 172 aa18.06■□□□□ 0.48
VAPA-205ENST00000578314 KCNK7Q9Y2U2 307 aa18.06■□□□□ 0.48
VAPA-205ENST00000578314 IGF1P05019 195 aa18.05■□□□□ 0.48
VAPA-205ENST00000578314 IGLL1P15814 213 aa18.05■□□□□ 0.48
VAPA-205ENST00000578314 RAB6AP20340 208 aa18.05■□□□□ 0.48
VAPA-205ENST00000578314 FGF9P31371 208 aaPredicted RBP18.05■□□□□ 0.48
VAPA-205ENST00000578314 CEACAM6P40199 344 aa18.05■□□□□ 0.48
VAPA-205ENST00000578314 MMDQ15546 238 aa18.05■□□□□ 0.48
VAPA-205ENST00000578314 PTX4Q96A99 478 aa18.05■□□□□ 0.48
VAPA-205ENST00000578314 PHF21AQ96BD5 680 aa18.05■□□□□ 0.48
VAPA-205ENST00000578314 RAB3CQ96E17 227 aa18.05■□□□□ 0.48
VAPA-205ENST00000578314 C11orf54Q9H0W9 315 aaPredicted RBP18.05■□□□□ 0.48
VAPA-205ENST00000578314 OR1A1Q9P1Q5 309 aa18.05■□□□□ 0.48
VAPA-205ENST00000578314 DNAH3Q8TD57 4116 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 TRDCB7Z8K6 153 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 RRP9O43818 475 aaKnown RBP18.04■□□□□ 0.48
VAPA-205ENST00000578314 CT45A6P0DMU7 189 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 CT45A5P0DMU8 189 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 CT45A7P0DMV0 189 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 PSMB9P28065 219 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 CFHR3Q02985 330 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 MOGAT2Q3SYC2 334 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 RPL39P5Q59GN2 51 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 ETV3LQ6ZN32 361 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 REC114Q7Z4M0 266 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 NR2C2APQ86WQ0 139 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 NPBQ8NG41 125 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 OR10R2Q8NGX6 335 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 EDARADDQ8WWZ3 215 aa18.04■□□□□ 0.48
VAPA-205ENST00000578314 IGKV1-6A0A0C4DH72 117 aa18.03■□□□□ 0.48
VAPA-205ENST00000578314 RAB27BO00194 218 aa18.03■□□□□ 0.48
VAPA-205ENST00000578314 HSPA12AO43301 675 aa18.03■□□□□ 0.48
VAPA-205ENST00000578314 C18orf65Q6ZTR6 163 aa18.03■□□□□ 0.48
VAPA-205ENST00000578314 LINC00482Q8N8I6 264 aa18.03■□□□□ 0.48
VAPA-205ENST00000578314 RNF152Q8N8N0 203 aa18.03■□□□□ 0.48
VAPA-205ENST00000578314 RCC1LQ96I51 464 aaKnown RBP18.03■□□□□ 0.48
VAPA-205ENST00000578314 CHCHD6Q9BRQ6 235 aa18.03■□□□□ 0.48
VAPA-205ENST00000578314 NECAP2Q9NVZ3 263 aa18.03■□□□□ 0.48
VAPA-205ENST00000578314 TXNL4BQ9NX01 149 aaKnown RBP18.03■□□□□ 0.48
VAPA-205ENST00000578314 ZNF107Q9UII5 783 aaPredicted RBP18.03■□□□□ 0.48
VAPA-205ENST00000578314 NBR2O15453 112 aa18.02■□□□□ 0.48
VAPA-205ENST00000578314 PRB2P02812 416 aaPredicted RBP18.02■□□□□ 0.48
VAPA-205ENST00000578314 ELANEP08246 267 aa18.02■□□□□ 0.48
VAPA-205ENST00000578314 SLC2A2P11168 524 aaPredicted RBP18.02■□□□□ 0.48
VAPA-205ENST00000578314 CNTFRP26992 372 aa18.02■□□□□ 0.48
VAPA-205ENST00000578314 THBS3P49746 956 aa18.02■□□□□ 0.48
VAPA-205ENST00000578314 FOXE3Q13461 319 aa18.02■□□□□ 0.48
VAPA-205ENST00000578314 ZNF773Q6PK81 442 aa18.02■□□□□ 0.48
VAPA-205ENST00000578314 ABHD14BQ96IU4 210 aa18.02■□□□□ 0.48
VAPA-205ENST00000578314 TOLLIPQ9H0E2 274 aa18.02■□□□□ 0.48
VAPA-205ENST00000578314 STUB1Q9UNE7 303 aa18.02■□□□□ 0.48
VAPA-205ENST00000578314 OR5H14A6NHG9 310 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 MFNGO00587 321 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 PROP1O75360 226 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 NDUFA3O95167 84 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 DUS4LO95620 317 aaKnown RBP18.01■□□□□ 0.47
VAPA-205ENST00000578314 IGHG4P01861 327 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 HLA-DRB1P01911 266 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 CD3GP09693 182 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 GADD45AP24522 165 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 MC5RP33032 325 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 MRPS15P82914 257 aaKnown RBP18.01■□□□□ 0.47
VAPA-205ENST00000578314 C5orf64Q2M2E5 130 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 FOXB2Q5VYV0 432 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 ZNF695Q8IW36 515 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 MRPL41Q8IXM3 137 aaKnown RBP18.01■□□□□ 0.47
VAPA-205ENST00000578314 OR5AN1Q8NGI8 311 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 OR4A4PQ8NGN8 299 aa18.01■□□□□ 0.47
VAPA-205ENST00000578314 A0A0B4J203 849 aa18■□□□□ 0.47
VAPA-205ENST00000578314 METTL21EPA6NDL7 271 aa18■□□□□ 0.47
VAPA-205ENST00000578314 H0YJW9 148 aa18■□□□□ 0.47
VAPA-205ENST00000578314 RPLP1P05386 114 aaKnown RBP18■□□□□ 0.47
VAPA-205ENST00000578314 VDAC1P21796 283 aa18■□□□□ 0.47
VAPA-205ENST00000578314 MYCNOSP40205 109 aa18■□□□□ 0.47
VAPA-205ENST00000578314 SERPINB10P48595 397 aa18■□□□□ 0.47
VAPA-205ENST00000578314 CXorf66Q5JRM2 361 aaPredicted RBP18■□□□□ 0.47
VAPA-205ENST00000578314 LIN54Q6MZP7 749 aa18■□□□□ 0.47
VAPA-205ENST00000578314 FAM131AQ6UXB0 335 aa18■□□□□ 0.47
VAPA-205ENST00000578314 C8orf86Q6ZUL3 223 aa18■□□□□ 0.47
VAPA-205ENST00000578314 TPRA1Q86W33 373 aa18■□□□□ 0.47
VAPA-205ENST00000578314 KLHL30-AS1Q8NEE0 82 aa18■□□□□ 0.47
VAPA-205ENST00000578314 P2RX4Q99571 388 aa18■□□□□ 0.47
VAPA-205ENST00000578314 RDH8Q9NYR8 311 aa18■□□□□ 0.47
VAPA-205ENST00000578314 IGHV7-81A0A0B4J1V7 117 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 NOTOA8MTQ0 251 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 NUDT19A8MXV4 375 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 FABP7O15540 132 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 FCGR3AP08637 254 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 OR5H8P0DN80 308 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 HIST1H1DP16402 221 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms