RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 PTPRDP23468 1912 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 ANAPC1Q9H1A4 1944 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 PLXNB3Q9ULL4 1909 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 CCDC88CQ9P219 2028 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 LOC102724200A0A096LPH7 203 aaPredicted RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 IGKV6D-21A0A0A0MT36 114 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 IGHV7-81A0A0B4J1V7 117 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 IGKV6-21A0A0C4DH24 114 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 IGHV2-70DA0A0C4DH43 119 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SMIM28A0A1B0GU29 152 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 A0A1B0GUS0 222 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 A0A1B0GV50 99 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SERTM2A0A1B0GWG4 89 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 DAPL1A0PJW8 107 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 C20orf202A1L168 122 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF860A6NHJ4 632 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR4C45A6NMZ5 311 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 IFITM5A6NNB3 132 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PPP5D1E7EU14 171 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 J3QLW9 94 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 K7ERQ8 282 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 K7N7A8 449 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CYB5BO43169 146 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF208O43345 1280 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 KDELR3O43731 214 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 DUX1O43812 170 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 GMFGO60234 142 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 B4GALT2O60909 372 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SCGB2A1O75556 95 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CTAG2O75638 210 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR2J2O76002 312 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 RPP14O95059 124 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 AIFM1O95831 613 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SNAI1O95863 264 aaPredicted RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 EPPINO95925 133 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CD160O95971 181 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CSTAP01040 98 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 GCGP01275 180 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 IFNA21P01568 189 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CD3DP04234 171 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 GAPDHP04406 335 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CST2P09228 141 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CTXN2P0C2S0 81 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR5G3P0C626 314 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF735P0CB33 412 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF286BP0CG31 522 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 AKAIN1P0CW23 69 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PGA3P0DJD8 388 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 GIMD1P0DJR0 217 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR13C7P0DN81 318 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CALCBP10092 127 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 IL9P15248 144 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 AKR1C4P17516 323 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SERPINA2P20848 420 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PTNP21246 168 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 GSTM3P21266 225 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CSRP1P21291 193 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 VDAC1P21796 283 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC2A5P22732 501 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 HSD11B1P28845 292 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 NTSP30990 170 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PPP1CCP36873 323 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SNCAP37840 140 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 KIR2DS2P43631 304 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PPICP45877 212 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 GABRA4P48169 554 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC11A1P49279 550 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 IDH3GP51553 393 aaPredicted RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 RND2P52198 227 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 EFNB2P52799 333 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 KLF3P57682 345 aaPredicted RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR12D2P58182 307 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 TAS2R41P59536 307 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 TAS2R43P59537 309 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 S100A10P60903 97 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 UBE2KP61086 200 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC35A1P78382 337 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 RPL19P84098 196 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF616Q08AN1 781 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 FUT5Q11128 374 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ST3GAL3Q11203 375 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 FOXF1Q12946 379 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SCGB2A2Q13296 93 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 EIF4EBP2Q13542 120 aaPredicted RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ELAVL3Q14576 367 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ATP6V1FQ16864 119 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 LINC01620Q4KN68 170 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 TP53I3Q53FA7 332 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 HIKESHIQ53FT3 197 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ACSM3Q53FZ2 586 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 COA6Q5JTJ3 125 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 COL5A1-AS1Q5SY13 56 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SPATA46Q5T0L3 261 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PRAMEF20Q5VT98 475 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 DENND4CQ5VZ89 1909 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OTPQ5XKR4 325 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 EIF5AL1Q6IS14 154 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 C1orf94Q6P1W5 598 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PRSS54Q6PEW0 395 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 TOMM20LQ6UXN7 152 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms