RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 RPS10P46783 165 aaKnown RBP7.51□□□□□ -1.21
NCBP3-204ENST00000574911 TNFRSF9Q07011 255 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 MSMO1Q15800 293 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF343Q6P1L6 599 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 FAM214BQ7L5A3 538 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 CENPVQ7Z7K6 275 aaPredicted RBP7.51□□□□□ -1.21
NCBP3-204ENST00000574911 GCNT2Q8N0V5 402 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 WDR31Q8NA23 367 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 SVIPQ8NHG7 77 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 PRR7Q8TB68 274 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 CA5BP1Q8WTZ4 195 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 TCTEX1D2Q8WW35 142 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 TAF15Q92804 592 aaKnown RBP eCLIP7.51□□□□□ -1.21
NCBP3-204ENST00000574911 PINX1Q96BK5 328 aaKnown RBP7.51□□□□□ -1.21
NCBP3-204ENST00000574911 RCC1LQ96I51 464 aaKnown RBP7.51□□□□□ -1.21
NCBP3-204ENST00000574911 TRIB1Q96RU8 372 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 CXXC4Q9H2H0 198 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 OBP2BQ9NPH6 170 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 TIMM9Q9Y5J7 89 aa7.51□□□□□ -1.21
NCBP3-204ENST00000574911 ATXN7O15265 892 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 CLN5O75503 358 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 IGKV3-15P01624 115 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 HBZP02008 142 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 SLC38A11Q08AI6 406 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 PMS2P11Q13670 270 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 FAM53AQ6NSI3 398 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ACP7Q6ZNF0 438 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF826PQ6ZT77 177 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 COQ2Q96H96 371 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 P2RX4Q99571 388 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF251Q9BRH9 671 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 OR2D2Q9H210 308 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ESPL1Q14674 2120 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ZFP92A6NM28 416 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 AGFG2O95081 481 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 COX5AP20674 150 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 IL2RGP31785 369 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 EIF2S3P41091 472 aaKnown RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 FGF8P55075 233 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 BRWD1-AS2P59051 145 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ERVFRD-1P60508 538 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 RAB11AP62491 216 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 AESQ08117 197 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 Q6ZR03 302 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF407Q9C0G0 2248 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 TGIF2-C20orf24A0A0A6YYL0 155 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 LRRC30A6NM36 301 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF891A8MT65 544 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 CLDN1O95832 211 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF806P0C7X5 589 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 HOXA5P20719 270 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 G6PCP35575 357 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 KIR2DL2P43627 348 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 HOXA4Q00056 320 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 PNRC1Q12796 327 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 KIAA0141Q14154 515 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ATP6V1FQ16864 119 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 MRGPRGQ86SM5 289 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 CXorf67Q86X51 503 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF808Q8N4W9 903 aaPredicted RBP7.5□□□□□ -1.21
NCBP3-204ENST00000574911 VAX2Q9UIW0 290 aa7.5□□□□□ -1.21
NCBP3-204ENST00000574911 MED13Q9UHV7 2174 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 UBE2L5PA0A1B0GUS4 154 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 ODAMA1E959 279 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 PMS2P5A8MQ11 134 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 C17orf98A8MV24 154 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 WISP2O76076 250 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 S1PR2O95136 353 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 KITLGP21583 273 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF816Q0VGE8 651 aaPredicted RBP7.49□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF674Q2M3X9 581 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 PRAMEF6Q5VXH4 476 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 WDR82Q6UXN9 313 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 TCTEX1D1Q8N7M0 179 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 C1orf162Q8NEQ5 155 aaPredicted RBP7.49□□□□□ -1.21
NCBP3-204ENST00000574911 SDF2L1Q9HCN8 221 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.49□□□□□ -1.21
NCBP3-204ENST00000574911 TMEM242Q9NWH2 141 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 METRNQ9UJH8 293 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 MAP1LC3B2A6NCE7 125 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 IFNL4K9M1U5 179 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 RAB29O14966 203 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 KRASP01116 189 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 IGKV1D-33P01593 117 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 IGKV1-33P01594 117 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 TFF1P04155 84 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 TUBG1P23258 451 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 RND2P52198 227 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 ELLP55199 621 aaPredicted RBP7.49□□□□□ -1.21
NCBP3-204ENST00000574911 CATR1Q13166 79 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 OR2B11Q5JQS5 317 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 OR8G2PQ6IF36 304 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 CNEP1R1Q8N9A8 125 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 ZNF610Q8N9Z0 462 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 C9orf106Q8NAJ2 232 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 MRGPRDQ8TDS7 321 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 LURAP1Q96LR2 239 aa7.49□□□□□ -1.21
NCBP3-204ENST00000574911 MRPL37Q9BZE1 423 aaKnown RBP7.49□□□□□ -1.21
NCBP3-204ENST00000574911 MAP1LC3BQ9GZQ8 125 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms