RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 OR5P3Q8WZ94 311 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 ZNF501Q96CX3 271 aaPredicted RBP12.23□□□□□ -0.45
SMG6-215ENST00000574501 FAM103A1Q9BTL3 118 aaKnown RBP12.23□□□□□ -0.45
SMG6-215ENST00000574501 RNF114Q9Y508 228 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 ATP23Q9Y6H3 246 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 hCG_38984A0A1B0GV85 526 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 LINC01565O15544 149 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 NDUFB4O95168 129 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 CLDN1O95832 211 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 CA3P07451 260 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 SLC25A6P12236 298 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 MYF5P13349 255 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 RANP62826 216 aaKnown RBP12.23□□□□□ -0.45
SMG6-215ENST00000574501 RBX1P62877 108 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 STPG4Q8N801 248 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 KIR2DS1A0A191URI9 304 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 C20orf202A1L168 122 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 RBFOX2O43251 390 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMG6-215ENST00000574501 NDUFB8O95169 186 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 KIR2DS4P43632 304 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 GNB1P62873 340 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 KIR2DS1Q14954 304 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 MSMO1Q15800 293 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 HLA-BQ31612 363 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 Q6ZVH6 145 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 ABCA7Q8IZY2 2146 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 ZNF709Q8N972 641 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 OR5AU1Q8NGC0 362 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 OR2W1Q9Y3N9 320 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 LNP1A1A4G5 178 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 CCL25O15444 150 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 ATP5G3P48201 142 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 COMPP49747 757 aaPredicted RBP12.22□□□□□ -0.45
SMG6-215ENST00000574501 PAFAH1B2P68402 229 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 TFF3Q07654 80 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 COTL1Q14019 142 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 TMPRSS7Q7RTY8 843 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 ZIC4Q8N9L1 334 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 FGFBP3Q8TAT2 258 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 RNF138Q8WVD3 245 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 SGCZQ96LD1 299 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 SAMD10Q9BYL1 202 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 CHRNA10Q9GZZ6 450 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 PCED1AQ9H1Q7 454 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 MTIF3Q9H2K0 278 aaKnown RBP12.22□□□□□ -0.45
SMG6-215ENST00000574501 SDK1Q7Z5N4 2213 aa12.22□□□□□ -0.45
SMG6-215ENST00000574501 IGLV3-32A0A0A0MS00 114 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 TRAV39A0A0B4J263 110 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 AQP7O14520 342 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 HS3ST1O14792 307 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 CRISP2P16562 243 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 LHX2P50458 406 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 PTTG1IPP53801 180 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 FOXL1Q12952 345 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 ZNF324BQ6AW86 544 aaPredicted RBP12.21□□□□□ -0.45
SMG6-215ENST00000574501 UBALD1Q8TB05 177 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 CLDN23Q96B33 292 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 FGF21Q9NSA1 209 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 OR1A1Q9P1Q5 309 aa12.21□□□□□ -0.45
SMG6-215ENST00000574501 THBS3P49746 956 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 GPM6AP51674 278 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 KRTDAPP60985 99 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 PSG4Q00888 419 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 BAGE3Q86Y29 109 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 BAGE2Q86Y30 109 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 SFRP2Q96HF1 295 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 ALKBH3Q96Q83 286 aaPredicted RBP12.21□□□□□ -0.46
SMG6-215ENST00000574501 TMEM204Q9BSN7 226 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 CRIM1Q9NZV1 1036 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 FREM2Q5SZK8 3169 aa12.21□□□□□ -0.46
SMG6-215ENST00000574501 FRYLO94915 3013 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 A0A1W2PPC4 97 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 LSM10Q969L4 123 aaKnown RBP12.2□□□□□ -0.46
SMG6-215ENST00000574501 OR6C1Q96RD1 312 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 PARD6GQ9BYG4 376 aaPredicted RBP12.2□□□□□ -0.46
SMG6-215ENST00000574501 FBXL7Q9UJT9 491 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 TIMM9Q9Y5J7 89 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 SDK2Q58EX2 2172 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 G3V3Y1 287 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 CTXN2P0C2S0 81 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 NTF4P34130 210 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 ZNF585BQ52M93 769 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 RAET1LQ5VY80 246 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 OR1L1Q8NH94 360 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 C22orf15Q8WYQ4 148 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 RDH5Q92781 318 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 WIPI2Q9Y4P8 454 aa12.2□□□□□ -0.46
SMG6-215ENST00000574501 TRAV34A0A0B4J273 112 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 OR6C6A6NF89 314 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 TNFSF11O14788 317 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 OR5G3P0C626 314 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 FRMD6-AS1P0C7T7 363 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 TDGF1P13385 188 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 CLDN15P56746 228 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 YPEL3P61236 119 aaPredicted RBP12.19□□□□□ -0.46
SMG6-215ENST00000574501 SAPCD1Q5SSQ6 148 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 BTF3L4Q96K17 158 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 FGF23Q9GZV9 251 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms