RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 AP4M1O00189 453 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 SAA2P0DJI9 122 aaPredicted RBP13.59□□□□□ -0.23
SMG6-212ENST00000573153 C22orf42Q6IC83 251 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 NR2C2APQ86WQ0 139 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 IL1F10Q8WWZ1 152 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 MRPL20Q9BYC9 149 aaKnown RBP13.59□□□□□ -0.23
SMG6-212ENST00000573153 TOLLIPQ9H0E2 274 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 PIPOXQ9P0Z9 390 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 STUB1Q9UNE7 303 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 KCNK7Q9Y2U2 307 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 RAB27BO00194 218 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 RAB29O14966 203 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 PROP1O75360 226 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 DIRAS3O95661 229 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 PF4V1P10720 104 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 SLC6A1P30531 599 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 OR3A3P47888 321 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 THBS3P49746 956 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 SLC35B1P78383 322 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 MRPL41Q8IXM3 137 aaKnown RBP13.58□□□□□ -0.24
SMG6-212ENST00000573153 EDARADDQ8WWZ3 215 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 P2RX4Q99571 388 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 RASL11BQ9BPW5 248 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 CMSS1Q9BQ75 279 aaKnown RBP13.58□□□□□ -0.24
SMG6-212ENST00000573153 NECAP2Q9NVZ3 263 aa13.58□□□□□ -0.24
SMG6-212ENST00000573153 TXNL4BQ9NX01 149 aaKnown RBP13.58□□□□□ -0.24
SMG6-212ENST00000573153 MFNGO00587 321 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 IGF1P05019 195 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 ZBTB25P24278 435 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 CNTFRP26992 372 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 PSMB9P28065 219 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 KRTAP10-11P60412 298 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 KCTD21Q4G0X4 260 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 LCNL1Q6ZST4 164 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 C8orf86Q6ZUL3 223 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 TPRA1Q86W33 373 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 OR10R2Q8NGX6 335 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 SETD6Q8TBK2 473 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 RAB3CQ96E17 227 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 GON7Q9BXV9 100 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 ZFP57Q9NU63 452 aa13.57□□□□□ -0.24
SMG6-212ENST00000573153 ZNF107Q9UII5 783 aaPredicted RBP13.57□□□□□ -0.24
SMG6-212ENST00000573153 IGKV1-6A0A0C4DH72 117 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 NOTOA8MTQ0 251 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 TRDCB7Z8K6 153 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 ST8SIA5O15466 376 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 NDUFA3O95167 84 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 SCTP09683 121 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 SNRPBP14678 240 aaKnown RBP13.56□□□□□ -0.24
SMG6-212ENST00000573153 CD33P20138 364 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 SOX6P35712 828 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 SRSF7Q16629 238 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMG6-212ENST00000573153 MOGAT2Q3SYC2 334 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 NPBQ8NG41 125 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 OR4A4PQ8NGN8 299 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 MYOZ3Q8TDC0 251 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 CHCHD6Q9BRQ6 235 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMG6-212ENST00000573153 OR1A1Q9P1Q5 309 aa13.56□□□□□ -0.24
SMG6-212ENST00000573153 METTL21EPA6NDL7 271 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 OR5H14A6NHG9 310 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 HLA-DRB1P01911 266 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 RPLP1P05386 114 aaKnown RBP13.55□□□□□ -0.24
SMG6-212ENST00000573153 CT45A6P0DMU7 189 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 CT45A5P0DMU8 189 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 CT45A7P0DMV0 189 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 HIST1H1DP16402 221 aaKnown RBP13.55□□□□□ -0.24
SMG6-212ENST00000573153 GADD45AP24522 165 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 PPIFP30405 207 aaKnown RBP13.55□□□□□ -0.24
SMG6-212ENST00000573153 CEACAM6P40199 344 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 SERPINB10P48595 397 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 ACTBP60709 375 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 EGFEM1PQ0D2K5 195 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 MMDQ15546 238 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 C19orf54Q5BKX5 351 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 TEX38Q6PEX7 206 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 Q6ZS49 121 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 REC114Q7Z4M0 266 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 CABLES2Q9BTV7 478 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 C11orf54Q9H0W9 315 aaPredicted RBP13.55□□□□□ -0.24
SMG6-212ENST00000573153 SSR3Q9UNL2 185 aa13.55□□□□□ -0.24
SMG6-212ENST00000573153 RRP15Q9Y3B9 282 aaKnown RBP13.55□□□□□ -0.24
SMG6-212ENST00000573153 K7EIL1 84 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 NBR2O15453 112 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 RRP9O43818 475 aaKnown RBP13.54□□□□□ -0.24
SMG6-212ENST00000573153 PF4P02776 101 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 FCGR3AP08637 254 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 CD3GP09693 182 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 MC5RP33032 325 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 NDPQ00604 133 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 FOXE3Q13461 319 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 KIAA0141Q14154 515 aaPredicted RBP13.54□□□□□ -0.24
SMG6-212ENST00000573153 KIR2DS1Q14954 304 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 ARL6IP1Q15041 203 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 PNLIPRP3Q17RR3 467 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 RPL39P5Q59GN2 51 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 KHDC1LQ5JSQ8 128 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 OR5AN1Q8NGI8 311 aa13.54□□□□□ -0.24
SMG6-212ENST00000573153 RCC1LQ96I51 464 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms