RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 B9D2Q9BPU9 175 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 RASL11BQ9BPW5 248 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 CHCHD6Q9BRQ6 235 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 DCLRE1BQ9H816 532 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 IGHV1-3A0A0C4DH29 117 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 LOC100130705A0A1B0GUX0 176 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 WI2-2373I1.2A0A1W2PRP0 233 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 MCRIP1C9JLW8 97 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 CASQ2O14958 399 aaPredicted RBP7.27□□□□□ -1.25
CIITA-208ENST00000572665 SPINT2O43291 252 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 BAG2O95816 211 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 MOSP00540 346 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 OR5H8P0DN80 308 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 SERPINA2P20848 420 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 VDAC1P21796 283 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 DCKP27707 260 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 CD1BP29016 333 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 BDKRB2P30411 391 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 HOXD3P31249 432 aaPredicted RBP7.27□□□□□ -1.25
CIITA-208ENST00000572665 SSTR5P35346 364 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 RBM11P57052 281 aaKnown RBP7.27□□□□□ -1.25
CIITA-208ENST00000572665 PIGYQ3MUY2 71 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 ATAD3CQ5T2N8 411 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 C6orf183Q5T699 404 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 C9orf66Q5T8R8 295 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 ASPHD1Q5U4P2 390 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 C10orf99Q6UWK7 81 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 ASCL4Q6XD76 172 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 OR5M8Q8NGP6 311 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 RHOXF1Q8NHV9 184 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 LEAP2Q969E1 77 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 ABCG5Q9H222 651 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 C8orf4Q9NR00 106 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 TAS2R4Q9NYW5 299 aa7.27□□□□□ -1.25
CIITA-208ENST00000572665 AIPO00170 330 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 CCL24O00175 119 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 CA11O75493 328 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 IGHV3-7P01780 117 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 GABRB1P18505 474 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 GPR12P47775 334 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 CDX1P47902 265 aaPredicted RBP7.26□□□□□ -1.25
CIITA-208ENST00000572665 RAB25P57735 213 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 KRTAP10-11P60412 298 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 RIPK1Q13546 671 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 GPR50Q13585 617 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 PIK3CD-AS1Q5SR53 167 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 OGFRL1Q5TC84 451 aaPredicted RBP7.26□□□□□ -1.25
CIITA-208ENST00000572665 ANKRD13BQ86YJ7 626 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 PACRGLQ8N7B6 248 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 OR52I1Q8NGK6 324 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 OR10K1Q8NGX5 313 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 PLPPR1Q8TBJ4 325 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 THRSPQ92748 146 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 NOL4LQ96MY1 436 aaPredicted RBP7.26□□□□□ -1.25
CIITA-208ENST00000572665 RDH12Q96NR8 316 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 P2RX4Q99571 388 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 AMBNQ9NP70 447 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 FGF20Q9NP95 211 aaPredicted RBP7.26□□□□□ -1.25
CIITA-208ENST00000572665 GNG12Q9UBI6 72 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 HSPB7Q9UBY9 170 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 TRAPPC2LQ9UL33 140 aa7.26□□□□□ -1.25
CIITA-208ENST00000572665 E9PI62 339 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 H0YHG0 523 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 GEMIN2O14893 280 aaKnown RBP7.25□□□□□ -1.25
CIITA-208ENST00000572665 CDRT1O95170 752 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 SOX6P35712 828 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 KIR2DS1Q14954 304 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 SLC22A6Q4U2R8 563 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 YIF1BQ5BJH7 314 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 CDH26Q8IXH8 852 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 RTN4IP1Q8WWV3 396 aaPredicted RBP7.25□□□□□ -1.25
CIITA-208ENST00000572665 SMIM19Q96E16 107 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 S1PR3Q99500 378 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 BABAM2Q9NXR7 383 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 KCNIP1Q9NZI2 227 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 ZNF580Q9UK33 172 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 ERGIC3Q9Y282 383 aa7.25□□□□□ -1.25
CIITA-208ENST00000572665 EXOSC1Q9Y3B2 195 aaKnown RBP7.25□□□□□ -1.25
CIITA-208ENST00000572665 A0A1W2PPE3 182 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 FAM90A10PA6NDY2 464 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 C15orf65H3BRN8 121 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 LDLRAD4O15165 306 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 RGS11O94810 467 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 MT-ND4P03905 459 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 GLAP06280 429 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 LIMS3P0CW19 117 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 LIMS4P0CW20 117 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 REG1BP48304 166 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 INSL3P51460 131 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 GTF2A1P52655 376 aaPredicted RBP7.24□□□□□ -1.25
CIITA-208ENST00000572665 ZNF137PP52743 207 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 TAS2R43P59537 309 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 DIAPH2-AS1Q14236 149 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 LRRC36Q1X8D7 754 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 Q499Y3 187 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 ZNF497Q6ZNH5 498 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 SLC25A48Q6ZT89 311 aaKnown RBP7.24□□□□□ -1.25
CIITA-208ENST00000572665 ZNF554Q86TJ5 538 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 Q8N6K4 173 aa7.24□□□□□ -1.25
CIITA-208ENST00000572665 Q8N9W7 124 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms