RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 BLVRBP30043 206 aaPredicted RBP14.08□□□□□ -0.16
CHD3-214ENST00000572579 AQP4P55087 323 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 LINC00205P59089 165 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 RPS25P62851 125 aaKnown RBP14.08□□□□□ -0.16
CHD3-214ENST00000572579 DGCR2P98153 550 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 PLA2G7Q13093 441 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 TPBGQ13641 420 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 MED22Q15528 200 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 C5orf64Q2M2E5 130 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 GLDNQ6ZMI3 551 aaPredicted RBP14.08□□□□□ -0.16
CHD3-214ENST00000572579 ZNF491Q8N8L2 437 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 MINDY2Q8NBR6 621 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 KCNG3Q8TAE7 436 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 IL1F10Q8WWZ1 152 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 AK3Q9UIJ7 227 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 TRBV6-6A0A0A6YYG2 114 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 NBR2O15453 112 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 NDUFA3O95167 84 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 GNB1P62873 340 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 OR2AK2Q8NG84 335 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 OR11H1Q8NG94 326 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 DPF1Q92782 380 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 ABHD14BQ96IU4 210 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 PRR25Q96S07 402 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 OR1A1Q9P1Q5 309 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 SLC23A1Q9UHI7 598 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 AK6Q9Y3D8 172 aaKnown RBP14.07□□□□□ -0.16
CHD3-214ENST00000572579 LRRC42Q9Y546 428 aa14.07□□□□□ -0.16
CHD3-214ENST00000572579 IGKV1-6A0A0C4DH72 117 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 BPNT1O95861 308 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 LIN54Q6MZP7 749 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 FAM131AQ6UXB0 335 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 OR6M1Q8NGM8 313 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 OR5M8Q8NGP6 311 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 CASTOR1Q8WTX7 329 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 OR5B12Q96R08 314 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 C11orf54Q9H0W9 315 aaPredicted RBP14.06□□□□□ -0.16
CHD3-214ENST00000572579 ALX4Q9H161 411 aaPredicted RBP14.06□□□□□ -0.16
CHD3-214ENST00000572579 FBXL15Q9H469 300 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 PARP11Q9NR21 331 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 PLEKHJ1Q9NW61 149 aa14.06□□□□□ -0.16
CHD3-214ENST00000572579 H0YJW9 148 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 RGS11O94810 467 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 SCTP09683 121 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 MAP2K4P45985 399 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 RAB9AP51151 201 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 CLDN12P56749 244 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 CD69Q07108 199 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 PLAC9Q5JTB6 97 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 UBE2E2Q96LR5 201 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 CHCHD6Q9BRQ6 235 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 GAB2Q9UQC2 676 aa14.05□□□□□ -0.16
CHD3-214ENST00000572579 TRAV41A0A0B4J266 112 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 SEC14L6B5MCN3 397 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 SLC17A2O00624 439 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 LDLRAD4O15165 306 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 CX3CL1P78423 397 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 RUNX1Q01196 453 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 FABP5Q01469 135 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 OR5AN1Q8NGI8 311 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 OR1N2Q8NGR9 330 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 SETD6Q8TBK2 473 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 UFD1Q92890 307 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 ARHGAP5-AS1Q96IT6 56 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 Q9N2K0 584 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 TPSG1Q9NRR2 321 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 SCN3BQ9NY72 215 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 ABRACLQ9P1F3 81 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 RNF150Q9ULK6 438 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 KCNK7Q9Y2U2 307 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 NUBP2Q9Y5Y2 271 aa14.04□□□□□ -0.16
CHD3-214ENST00000572579 ITGB1BP1O14713 200 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 RAB29O14966 203 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 HSMCR30P0CW71 290 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 OR5H8P0DN80 308 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 ARSBP15848 533 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 CPEP16870 476 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 ECI1P42126 302 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 CRIP2P52943 208 aaPredicted RBP14.03□□□□□ -0.16
CHD3-214ENST00000572579 C9orf66Q5T8R8 295 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 FAM71F2Q6NXP2 309 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 DRAXINQ8NBI3 349 aaPredicted RBP14.03□□□□□ -0.16
CHD3-214ENST00000572579 PECRQ9BY49 303 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 CHMP1AQ9HD42 196 aaPredicted RBP14.03□□□□□ -0.16
CHD3-214ENST00000572579 PIPOXQ9P0Z9 390 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 STEAP1Q9UHE8 339 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 HSF4Q9ULV5 492 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 VSIG4Q9Y279 399 aa14.03□□□□□ -0.16
CHD3-214ENST00000572579 SHISA3A0PJX4 238 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 RRHO14718 337 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 RAMP3O60896 148 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 CRHBPP24387 322 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 CEACAM6P40199 344 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 C2orf76Q3KRA6 126 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 ZNF260Q3ZCT1 412 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 ZNF383Q8NA42 475 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 PTX4Q96A99 478 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 VCXQ9H320 206 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 ISYNA1Q9NPH2 558 aa14.02□□□□□ -0.17
CHD3-214ENST00000572579 DNAH7Q8WXX0 4024 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms