RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 FOXE3Q13461 319 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 TPBGQ13641 420 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 P2RY14Q15391 338 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 RAB11BQ15907 218 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 LY6G6FQ5SQ64 297 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 PRSS48Q7RTY5 328 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 C5orf24Q7Z6I8 188 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 YPEL2Q96QA6 119 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 HSPB9Q9BQS6 159 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 MCRIP2Q9BUT9 160 aaKnown RBP9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 ISYNA1Q9NPH2 558 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 ZNF107Q9UII5 783 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 SAA2-SAA4A0A096LPE2 208 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 A0A0A6YYD4 124 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 NAPSAO96009 420 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 ELANEP08246 267 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 SAA2P0DJI9 122 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 OR5H8P0DN80 308 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 CRHBPP24387 322 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 CALRP27797 417 aaKnown RBP9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 MYCNOSP40205 109 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 OR3A3P47888 321 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 ACTBP60709 375 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 QRFPP83859 136 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 IZUMO2Q6UXV1 221 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 TMEM91Q6ZNR0 172 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 ZNF833PQ6ZTB9 187 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 ODF3L1Q8IXM7 274 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 RBMXL1Q96E39 390 aaKnown RBP9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 NABP2Q9BQ15 211 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 ZNF251Q9BRH9 671 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 LPAR5Q9H1C0 372 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 IFI27L2Q9H2X8 130 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 RIMS4Q9H426 269 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 BLOC1S6Q9UL45 172 aa9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 AK6Q9Y3D8 172 aaKnown RBP9.71□□□□□ -0.86
CTDNEP1-205ENST00000570828 PAX4O43316 350 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 IGF1P05019 195 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 CD37P11049 281 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 HOXD3P31249 432 aaPredicted RBP9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 RANBP1P43487 201 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 RAB25P57735 213 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 FAM71F2Q6NXP2 309 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 ZNF880Q6PDB4 577 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 LCNL1Q6ZST4 164 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 OR8U1Q8NH10 309 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 CNBD2Q96M20 576 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 DUX3Q96PT4 197 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 P2RX4Q99571 388 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 GFI1Q99684 422 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 MGLLQ99685 303 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 ACOT13Q9NPJ3 140 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 C12orf4Q9NQ89 552 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 PIPOXQ9P0Z9 390 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 KIAA1456Q9P272 454 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 SLC23A1Q9UHI7 598 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 AK3Q9UIJ7 227 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 ZNF580Q9UK33 172 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 MGAT4AQ9UM21 535 aa9.7□□□□□ -0.86
CTDNEP1-205ENST00000570828 TRBV6-6A0A0A6YYG2 114 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 CCL24O00175 119 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 RAB29O14966 203 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 NBR2O15453 112 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 SOCS1O15524 211 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 HSPA12AO43301 675 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 IGHG4P01861 327 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 HLA-DRB1P01911 266 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 MAP2K4P45985 399 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 HLA-DRB3P79483 266 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 FABP5Q01469 135 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 CFHR3Q02985 330 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 EGFEM1PQ0D2K5 195 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 TBCEQ15813 527 aaPredicted RBP9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 DEFB136Q30KP8 78 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 FAM131AQ6UXB0 335 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 ZNF367Q7RTV3 350 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 RAX2Q96IS3 184 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 KCTD7Q96MP8 289 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 HDHD3Q9BSH5 251 aaPredicted RBP9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 PARP11Q9NR21 331 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 HSF4Q9ULV5 492 aa9.69□□□□□ -0.86
CTDNEP1-205ENST00000570828 K7EIL1 84 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 ZBTB25P24278 435 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 CNTFRP26992 372 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 CDX1P47902 265 aaPredicted RBP9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 VEGFCP49767 419 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 PSMD7P51665 324 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 CLDN12P56749 244 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 KRTAP10-11P60412 298 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 C5orf64Q2M2E5 130 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 FAM89BQ8N5H3 189 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 OR56B1Q8NGI3 324 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 FAM3DQ96BQ1 224 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 CHCHD6Q9BRQ6 235 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 OR51J1Q9H342 316 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 GHITMQ9H3K2 345 aa9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 ZMAT5Q9UDW3 170 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-205ENST00000570828 V9GY05 133 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms