RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TUSC2O75896 110 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 MMP23AO75900 390 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 NDUFB6O95139 128 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR8U9P0C7N5 309 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 CGB3P0DN86 165 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 CGB7P0DN87 165 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 CD34P28906 385 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 CCR6P51684 374 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 LOXL3P58215 753 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 TAS2R31P59538 309 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 IFITM3Q01628 133 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 PAX2Q02962 417 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 BAMBIQ13145 260 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 CATR1Q13166 79 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 KLRD1Q13241 179 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 SCGB2A2Q13296 93 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 HLA-DRB5Q30154 266 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 MORN2Q502X0 79 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 PLA1AQ53H76 456 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 AADACL3Q5VUY0 350 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 SLC25A48Q6ZT89 311 aaKnown RBP5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 CENPSQ8N2Z9 138 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF645Q8N7E2 425 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 Q8N7P7 452 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 C8orf31Q8N9H6 132 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 MINDY2Q8NBR6 621 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 BEND2Q8NDZ0 799 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR13C8Q8NGS7 320 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR8U1Q8NH10 309 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 TERB2Q8NHR7 220 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 MARCH1Q8TCQ1 289 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 RPEQ96AT9 228 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF486Q96H40 463 aaPredicted RBP5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 S1PR3Q99500 378 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 IFI27L2Q9H2X8 130 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 GHITMQ9H3K2 345 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 LIN7CQ9NUP9 197 aaKnown RBP5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 NUDT15Q9NV35 164 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 NUBP2Q9Y5Y2 271 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 ROS1P08922 2347 aa5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 FASNP49327 2511 aaKnown RBP5.38□□□□□ -1.55
CTDNEP1-204ENST00000570484 SAA2-SAA4A0A096LPE2 208 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 IGKV1D-13A0A0B4J2D9 117 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 TEX13DA0A0J9YY54 714 aaPredicted RBP5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 A0A1W2PRD5 423 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 A0A1W2PRF3 423 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 A0A1W2PRM7 423 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR5H14A6NHG9 310 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 LEUTXA8MZ59 168 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 J3QR06 171 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 M0R1X1 148 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 GPR31O00270 319 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 ITGB1BP1O14713 200 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 RAB29O14966 203 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 ARPC1BO15143 372 aaKnown RBP5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 PLA2G10O15496 165 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 CD5LO43866 347 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 APOA2P02652 100 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 SAA2P0DJI9 122 aaPredicted RBP5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 IGKV1-13P0DP09 117 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 ANXA3P12429 323 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 MMP9P14780 707 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 HTR1DP28221 377 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 SLC6A1P30531 599 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 BTCP35070 178 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 SRP14P37108 136 aaKnown RBP5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 UBE2E1P51965 193 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 PRB3Q04118 309 aaPredicted RBP5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 PAX8Q06710 450 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 C4orf46Q504U0 113 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 PHLDA2Q53GA4 152 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 LY6G6FQ5SQ64 297 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF626Q68DY1 528 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 CCDC144NLQ6NUI1 221 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 FAM71F2Q6NXP2 309 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 DHRS11Q6UWP2 260 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 SPNS3Q6ZMD2 512 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 KCTD9Q7L273 389 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 C5orf24Q7Z6I8 188 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 NRARPQ7Z6K4 114 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 TGIF2LXQ8IUE1 241 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 CIARTQ8N365 385 aaPredicted RBP5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZDHHC22Q8N966 263 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF439Q8NDP4 499 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR11H6Q8NGC7 330 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 TCTEX1D2Q8WW35 142 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 UPRTQ96BW1 309 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 ABHD14BQ96IU4 210 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 TBX15Q96SF7 602 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 TOLLIPQ9H0E2 274 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 PARP12Q9H0J9 701 aaKnown RBP5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 UNKLQ9H9P5 680 aaKnown RBP5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 YAE1D1Q9NRH1 226 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 RNF150Q9ULK6 438 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 FAM96BQ9Y3D0 163 aa5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 TBL2Q9Y4P3 447 aaKnown RBP5.37□□□□□ -1.55
CTDNEP1-204ENST00000570484 TRAV6A0A075B6T7 132 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 IGHV3OR16-10A0A075B7F0 116 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 IGHV1-69DA0A0B4J2H0 117 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms