RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 OR4P4Q8NGL7 312 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 OR6F1Q8NGZ6 308 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 OR56B4Q8NH76 319 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 SLC6A7Q99884 636 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 AGMATQ9BSE5 352 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 ABHD14AQ9BUJ0 271 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 C11orf54Q9H0W9 315 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-212ENST00000568539 MMP28Q9H239 520 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 IFI27L2Q9H2X8 130 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 ABCB10Q9NRK6 738 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 TMEM160Q9NX00 188 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 OR2W1Q9Y3N9 320 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 STAB1Q9NY15 2570 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 IGHV3OR16-10A0A075B7F0 116 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 IGKV1D-13A0A0B4J2D9 117 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 LINC00854A0A1B0GVQ3 168 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 A0A1W2PRD5 423 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 A0A1W2PRF3 423 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 A0A1W2PRM7 423 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 DISC1C4P0D8 188 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 BUB1B-PAK6H3BSN5 160 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 TOR1AO14656 332 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 NPFFO15130 113 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 IFNA6P05013 189 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 ARG1P05089 322 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 OR8U9P0C7N5 309 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 IGKV1-13P0DP09 117 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 FAUP35544 74 aaKnown RBP6.86□□□□□ -1.31
SF3B3-212ENST00000568539 RAB7AP51149 207 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 TSPAN5P62079 268 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 HLA-DRB5Q30154 266 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 MIDNQ504T8 468 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 LDLRAD2Q5SZI1 272 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 FAM120AOSQ5T036 256 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 AADACL3Q5VUY0 350 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 RUSC1-AS1Q66K80 236 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 C8orf86Q6ZUL3 223 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 LHFPL1Q86WI0 220 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 TMEM17Q86X19 198 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 ODF3L1Q8IXM7 274 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 TEX29Q8N6K0 151 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 OR51S1Q8NGJ8 323 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 OR8U1Q8NH10 309 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 NANPQ8TBE9 248 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 FAM216AQ8WUB2 273 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 BORCS5Q969J3 196 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 MRGPRFQ96AM1 343 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 MOB3AQ96BX8 217 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 AJUBAQ96IF1 538 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF2Q9BSG1 426 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-212ENST00000568539 GSX1Q9H4S2 264 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-212ENST00000568539 SLC2A8Q9NY64 477 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 TBC1D24Q9ULP9 559 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 ACANP16112 2415 aa6.86□□□□□ -1.31
SF3B3-212ENST00000568539 FBN1P35555 2871 aaKnown RBP6.85□□□□□ -1.31
SF3B3-212ENST00000568539 NAP1L6A6NFF2 107 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 OR5H14A6NHG9 310 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 LY6LH3BQJ8 138 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 PROP1O75360 226 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 HTR1DP28221 377 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 BTCP35070 178 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 SAA4P35542 130 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 LUMP51884 338 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF137PP52743 207 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 BPIFB3P59826 476 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 HERV-K104P61576 105 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 ASAH1Q13510 395 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 SCGB2B2Q4G0G5 96 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 MINOS1Q5TGZ0 78 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 BRD3OSQ6XYD6 125 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 C9orf139Q6ZV77 190 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 IL17RELQ6ZVW7 336 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 LHFPL4Q7Z7J7 247 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 LYG1Q8N1E2 194 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 OR10X1Q8NGY0 326 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 TERB2Q8NHR7 220 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 ST6GALNAC6Q969X2 333 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 CREB3L1Q96BA8 519 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 ABHD14BQ96IU4 210 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 PRRT1Q99946 306 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF251Q9BRH9 671 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 C7orf50Q9BRJ6 194 aaKnown RBP6.85□□□□□ -1.31
SF3B3-212ENST00000568539 FXYD6Q9H0Q3 95 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 OR2D2Q9H210 308 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 GHITMQ9H3K2 345 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 MCUBQ9NWR8 336 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 DPM3Q9P2X0 92 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 NUP50Q9UKX7 468 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 RNF150Q9ULK6 438 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 GAB2Q9UQC2 676 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 TBL2Q9Y4P3 447 aaKnown RBP6.85□□□□□ -1.31
SF3B3-212ENST00000568539 AMMECR1Q9Y4X0 333 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-212ENST00000568539 MINOS1-NBL1R4GNA1 71 aa6.85□□□□□ -1.31
SF3B3-212ENST00000568539 NSD1Q96L73 2696 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-212ENST00000568539 CR1P17927 2039 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 SAA2-SAA4A0A096LPE2 208 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 CENPXA8MT69 81 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 LEUTXA8MZ59 168 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 RAB29O14966 203 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 LYRM1O43325 122 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms