RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 HRH1P35367 487 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 PPP1CCP36873 323 aaKnown RBP6.3□□□□□ -1.4
SMG1-214ENST00000568038 CEACAM6P40199 344 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 RFX2P48378 723 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 GNG10P50151 68 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 LOXL3P58215 753 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 TAS2R46P59540 309 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 TAS2R19P59542 299 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 KRTAP1-1Q07627 177 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 CDK10Q15131 360 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 ZNF57Q68EA5 555 aaPredicted RBP6.3□□□□□ -1.4
SMG1-214ENST00000568038 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 C1orf122Q6ZSJ8 110 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 ABHD12Q8N2K0 398 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 PNKDQ8N490 385 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 TOMM5Q8N4H5 51 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 TMEM229BQ8NBD8 167 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 OR10A7Q8NGE5 316 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 OR5AP2Q8NGF4 316 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 OR10J5Q8NHC4 309 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 LHX4Q969G2 390 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 TRIM63Q969Q1 353 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 GINS4Q9BRT9 223 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 CABLES2Q9BTV7 478 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 TMEM133Q9H2Q1 129 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 HEXA-AS1Q9H8Q6 139 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 LINC00574Q9H8X3 128 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 ABCB10Q9NRK6 738 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 NECAP2Q9NVZ3 263 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 EHFQ9NZC4 300 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 ZNF69Q9UC07 566 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 RBMX2Q9Y388 322 aaKnown RBP6.3□□□□□ -1.4
SMG1-214ENST00000568038 CSMD2Q7Z408 3487 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 ABCA2Q9BZC7 2435 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 NOTCH2Q04721 2471 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 ABCA1O95477 2261 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 TRBV6-7A0A0A0MS04 114 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 IGHV2-26A0A0B4J1V2 119 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 ANKRD20A5PA0PJZ0 165 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 RNASEK-C17orf49H0YIS7 233 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 J3QLI3 93 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 RAB3DO95716 219 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 IFNA6P05013 189 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 CSF1P09603 554 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 CTXN2P0C2S0 81 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 OR5H8P0DN80 308 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 IL7P13232 177 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 NFYAP23511 347 aaPredicted RBP6.29□□□□□ -1.4
SMG1-214ENST00000568038 ZBTB25P24278 435 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 TSPAN5P62079 268 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 HTD2P86397 168 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 SSBP1Q04837 148 aaKnown RBP6.29□□□□□ -1.4
SMG1-214ENST00000568038 MORN2Q502X0 79 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 RNASE10Q5GAN6 216 aaKnown RBP6.29□□□□□ -1.4
SMG1-214ENST00000568038 HCP5Q6MZN7 132 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 FAAP20Q6NZ36 180 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 STEAP1BQ6NZ63 245 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 CLEC9AQ6UXN8 241 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 Q71RC1 249 aaPredicted RBP6.29□□□□□ -1.4
SMG1-214ENST00000568038 OR4D10Q8NGI6 311 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 OR52M1Q8NGK5 317 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 OR13D1Q8NGV5 346 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 TNFRSF14Q92956 283 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 CCDC32Q9BV29 185 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 TINAGL1Q9GZM7 467 aaPredicted RBP6.29□□□□□ -1.4
SMG1-214ENST00000568038 PARP12Q9H0J9 701 aaKnown RBP6.29□□□□□ -1.4
SMG1-214ENST00000568038 RDH8Q9NYR8 311 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 TAS2R8Q9NYW2 309 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 ZNRD1Q9P1U0 126 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 JPT1Q9UK76 154 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 PSG11Q9UQ72 335 aa6.29□□□□□ -1.4
SMG1-214ENST00000568038 RBM7Q9Y580 266 aaKnown RBP6.29□□□□□ -1.4
SMG1-214ENST00000568038 TRAV40A0A0B4J280 105 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 CENPVL3A0A0U1RRI6 287 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 A8MV72 311 aaPredicted RBP6.28□□□□□ -1.4
SMG1-214ENST00000568038 TOR1AO14656 332 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 SLC31A2O15432 143 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 YPEL1O60688 119 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 UPK1BO75841 260 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 RGS11O94810 467 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 CD74P04233 296 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 ARG1P05089 322 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 AKAIN1P0CW23 69 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 FCGR2CP31995 323 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 ZNF134P52741 427 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 FXYD4P59646 89 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 AP3S2P59780 193 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 DYRK1AQ13627 763 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 KLF9Q13886 244 aaPredicted RBP6.28□□□□□ -1.4
SMG1-214ENST00000568038 TMEM30BQ3MIR4 351 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 SCGB2B2Q4G0G5 96 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 ACTBL2Q562R1 376 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 CT45A1Q5HYN5 189 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 GPR157Q5UAW9 335 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 RUSC1-AS1Q66K80 236 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 NCR3LG1Q68D85 454 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 IL17RELQ6ZVW7 336 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 OVCH2Q7RTZ1 564 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 H1FOOQ8IZA3 346 aaPredicted RBP6.28□□□□□ -1.4
SMG1-214ENST00000568038 OR4C16Q8NGL9 310 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms