RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 SLC23A1Q9UHI7 598 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 A0A0A6YYH2 397 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 IGHV3-72A0A0B4J1Y9 119 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 A6NJ64 397 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 TXNL1O43396 289 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 LANCL1O43813 399 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 NOL3O60936 208 aaKnown RBP7.81□□□□□ -1.16
CLK3-220ENST00000567992 SCGNO76038 276 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 RGS11O94810 467 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 DIRAS3O95661 229 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 IGKV1D-33P01593 117 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 IGKV1-33P01594 117 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 GSTT2P0CG29 244 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 GSTT2BP0CG30 244 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 DTYMKP23919 212 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 ARFRP1Q13795 201 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 ARL6IP1Q15041 203 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 TMEM95Q3KNT9 176 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 IGSF11Q5DX21 431 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 GPR107Q5VW38 600 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 SHISA2Q6UWI4 295 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 MOB3BQ86TA1 216 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 TGIF2LXQ8IUE1 241 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 OR4A4PQ8NGN8 299 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 WIPF2Q8TF74 440 aaPredicted RBP7.81□□□□□ -1.16
CLK3-220ENST00000567992 RAB2BQ8WUD1 216 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 CAPSLQ8WWF8 208 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 C11orf54Q9H0W9 315 aaPredicted RBP7.81□□□□□ -1.16
CLK3-220ENST00000567992 ABCG5Q9H222 651 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 MGAM2Q2M2H8 2515 aa7.81□□□□□ -1.16
CLK3-220ENST00000567992 TRAV18A0A075B6X5 111 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 TRBV6-7A0A0A0MS04 114 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 SH2D7A6NKC9 451 aaPredicted RBP7.8□□□□□ -1.16
CLK3-220ENST00000567992 PROP1O75360 226 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 FAM106CPP0CH98 169 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 PTHLHP12272 177 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 TMEM11P17152 192 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 ZBTB25P24278 435 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 CD1BP29016 333 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 CEACAM6P40199 344 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 MRPS15P82914 257 aaKnown RBP7.8□□□□□ -1.16
CLK3-220ENST00000567992 KIR2DS1Q14954 304 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 PNLIPRP3Q17RR3 467 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 RPL39P5Q59GN2 51 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 UBE2NLQ5JXB2 153 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 FAM71F2Q6NXP2 309 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 OR2T6Q8NHC8 308 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 KCTD12Q96CX2 325 aaKnown RBP7.8□□□□□ -1.16
CLK3-220ENST00000567992 C5orf30Q96GV9 206 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 ABHD14BQ96IU4 210 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 EAF1Q96JC9 268 aaPredicted RBP7.8□□□□□ -1.16
CLK3-220ENST00000567992 NABP2Q9BQ15 211 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 MRPL20Q9BYC9 149 aaKnown RBP7.8□□□□□ -1.16
CLK3-220ENST00000567992 WNT10AQ9GZT5 417 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 AUNIPQ9H7T9 357 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 RDH8Q9NYR8 311 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 MOB4Q9Y3A3 225 aa7.8□□□□□ -1.16
CLK3-220ENST00000567992 EIF4EP06730 217 aaKnown RBP7.79□□□□□ -1.16
CLK3-220ENST00000567992 GNG2P59768 71 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 HES1Q14469 280 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 HNF4GQ14541 408 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 SPCS2Q15005 226 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 C11orf88Q6PI97 169 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 KLHDC1Q8N7A1 406 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 C5orf56Q8N8D9 126 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 SAMD12Q8N8I0 201 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 EDARADDQ8WWZ3 215 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 AKR1E2Q96JD6 320 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 PRSS22Q9GZN4 317 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 DCSTAMPQ9H295 470 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 PLSCR3Q9NRY6 295 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 PIPOXQ9P0Z9 390 aa7.79□□□□□ -1.16
CLK3-220ENST00000567992 MEGF8Q7Z7M0 2845 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 A0A1B0GVG6 124 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 RAB29O14966 203 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 BET1O15155 118 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 HSPA12AO43301 675 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 FGF16O43320 207 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 XRCC3O43542 346 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 MOSP00540 346 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 LPLP06858 475 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 CT45A6P0DMU7 189 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 CT45A5P0DMU8 189 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 CT45A7P0DMV0 189 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 TALDO1P37837 337 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 PITPNAQ00169 270 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 ABCA11PQ4W5N1 156 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 HIST2H2BDQ6DRA6 164 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 LINC00299Q6ZSB3 139 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 H1FOOQ8IZA3 346 aaPredicted RBP7.78□□□□□ -1.16
CLK3-220ENST00000567992 DTX3Q8N9I9 347 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 OR2T10Q8NGZ9 312 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 RITA1Q96K30 269 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 PALMDQ9NP74 551 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 RNF150Q9ULK6 438 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 BOLA1Q9Y3E2 137 aa7.78□□□□□ -1.16
CLK3-220ENST00000567992 M0QZK8 103 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 APOA1P02647 267 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 VDAC2P45880 294 aaPredicted RBP7.77□□□□□ -1.17
CLK3-220ENST00000567992 RORCP51449 518 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms