RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 PIK3IP1Q96FE7 263 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 PHB2Q99623 299 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 DHRS9Q9BPW9 319 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 TMEM204Q9BSN7 226 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 RIMS4Q9H426 269 aaPredicted RBP4.74□□□□□ -1.65
SF3B3-210ENST00000567654 RANBP3Q9H6Z4 567 aaPredicted RBP4.74□□□□□ -1.65
SF3B3-210ENST00000567654 KCNJ16Q9NPI9 418 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 RDH8Q9NYR8 311 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 RNF7Q9UBF6 113 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 DNAJB11Q9UBS4 358 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 SHPKQ9UHJ6 478 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 TRAPPC2LQ9UL33 140 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 ZDHHC8Q9ULC8 765 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 PPP1R3CQ9UQK1 317 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 RNF115Q9Y4L5 304 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 CFAP46Q8IYW2 2715 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 C13orf42A0A1B0GVH6 325 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 ODAMA1E959 279 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 OOEPA6NGQ2 149 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 TUBAL3A6NHL2 446 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 LYNX1G3V0Z9 82 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 K7N7A8 449 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 M0R233 179 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 ARPC5O15511 151 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 IFNA2P01563 188 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 HBZP02008 142 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 TK1P04183 234 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 HEXAP06865 529 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 LYNX1P0DP58 116 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 SELENOVP59797 346 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 IL15RAQ13261 267 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 EFNB3Q15768 340 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 LTC4SQ16873 150 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 C17orf58Q2M2W7 97 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 CD300EQ496F6 205 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-210ENST00000567654 ZNF672Q499Z4 452 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-210ENST00000567654 BEX5Q5H9J7 111 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 TEX36Q5VZQ5 186 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 GGNBP1Q5YKI7 109 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 LYPD2Q6UXB3 125 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 ZNF788Q6ZQV5 615 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 MOB1BQ7L9L4 216 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 LYZL2Q7Z4W2 148 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 SGPP2Q8IWX5 399 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 RFESDQ8TAC1 157 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 GLYATL2Q8WU03 294 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 PPP1R1CQ8WVI7 109 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 RTN4IP1Q8WWV3 396 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-210ENST00000567654 RBMXL1Q96E39 390 aaKnown RBP4.73□□□□□ -1.65
SF3B3-210ENST00000567654 GALNT14Q96FL9 552 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 SDSLQ96GA7 329 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 C18orf12Q96KH6 178 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 SNX22Q96L94 193 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 SCGB3A2Q96PL1 93 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 CCL13Q99616 98 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 SLC5A7Q9GZV3 580 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 SEBOXQ9HB31 216 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-210ENST00000567654 NGBQ9NPG2 151 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 CISD1Q9NZ45 108 aaKnown RBP4.73□□□□□ -1.65
SF3B3-210ENST00000567654 CTSZQ9UBR2 303 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 DKK2Q9UBU2 259 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 GLS2Q9UI32 602 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 FBXO9Q9UK97 447 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-210ENST00000567654 OR2W1Q9Y3N9 320 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 ABCA2Q9BZC7 2435 aa4.73□□□□□ -1.65
SF3B3-210ENST00000567654 MALRD1Q5VYJ5 2156 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 NBPF19A0A087WUL8 3843 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 FXYD6-FXYD2A0A087WZ82 144 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 A0A0G2JRQ6 117 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 TEX13DA0A0J9YY54 714 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 C3orf85A0A1B0GTC6 90 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 GAGE12BA1L429 117 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 RNF222A6NCQ9 220 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 GAGE12HA6NDE8 117 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 C5orf51A6NDU8 294 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 MSGN1A6NI15 193 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 TMEM178BH3BS89 294 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 GPR31O00270 319 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 TNFRSF13BO14836 293 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 MGST3O14880 152 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 SLC31A2O15432 143 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 MPPED1O15442 326 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 PHF1O43189 567 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 TSC22D2O75157 780 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 PGLYRP1O75594 196 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 MMP23AO75900 390 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 LY6HO94772 140 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 RGS11O94810 467 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 CLDN14O95500 239 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 DIRAS3O95661 229 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 CFDP00746 253 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 IGKV1-39P01597 117 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 IGKV1D-39P04432 117 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 CTXN2P0C2S0 81 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 OR8U9P0C7N5 309 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 CGB3P0DN86 165 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 CGB7P0DN87 165 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 TNFSF4P23510 183 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 OMGP23515 440 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 COL8A2P25067 703 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms