RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 OR2J1Q9GZK6 312 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 PRR14LQ5THK1 2151 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 DSPP15924 2871 aaKnown RBP12.03□□□□□ -0.48
CDH1-209ENST00000566510 RAMP3O60896 148 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 IFNA1P01562 189 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 CELA3BP08861 270 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 MRGPRGQ86SM5 289 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 WDR86Q86TI4 376 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 CXorf67Q86X51 503 aaPredicted RBP12.03□□□□□ -0.48
CDH1-209ENST00000566510 TAF15Q92804 592 aaKnown RBP eCLIP12.03□□□□□ -0.48
CDH1-209ENST00000566510 RPUSD4Q96CM3 377 aaKnown RBP12.03□□□□□ -0.48
CDH1-209ENST00000566510 SNX22Q96L94 193 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 SMIM7Q9BQ49 75 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 HIPK2Q9H2X6 1198 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 LOC400499M0QZD8 3231 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 C9orf172C9J069 976 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 RBMXL2O75526 392 aaKnown RBP12.03□□□□□ -0.48
CDH1-209ENST00000566510 PGA5P0DJD9 388 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 G6PCP35575 357 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 DCAF10Q5QP82 559 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 FAM53AQ6NSI3 398 aaPredicted RBP12.03□□□□□ -0.48
CDH1-209ENST00000566510 SLC25A22Q9H936 323 aa12.03□□□□□ -0.48
CDH1-209ENST00000566510 SH2D1BO14796 132 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 LY86O95711 162 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 ACP1P24666 158 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 MEOX1P50221 254 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 HOXA4Q00056 320 aaPredicted RBP12.02□□□□□ -0.49
CDH1-209ENST00000566510 CLEC12BQ2HXU8 276 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 TBC1D28Q2M2D7 210 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 ALKBH6Q3KRA9 238 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 MOB1BQ7L9L4 216 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.02□□□□□ -0.49
CDH1-209ENST00000566510 HIST3H2BBQ8N257 126 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 NANOS1Q8WY41 292 aaKnown RBP12.02□□□□□ -0.49
CDH1-209ENST00000566510 S100PBPQ96BU1 408 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 IDH3GP51553 393 aaPredicted RBP12.02□□□□□ -0.49
CDH1-209ENST00000566510 WDR25Q64LD2 544 aaPredicted RBP12.02□□□□□ -0.49
CDH1-209ENST00000566510 RPP25LQ8N5L8 163 aaKnown RBP12.02□□□□□ -0.49
CDH1-209ENST00000566510 OR13D1Q8NGV5 346 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 PINX1Q96BK5 328 aaKnown RBP12.02□□□□□ -0.49
CDH1-209ENST00000566510 OR2D2Q9H210 308 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 CLN8Q9UBY8 286 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 POLDIP2Q9Y2S7 368 aa12.02□□□□□ -0.49
CDH1-209ENST00000566510 KMT2EQ8IZD2 1858 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 TDGF1P13385 188 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 LURAP1LQ8IV03 231 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 P2RX4Q99571 388 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 ZPBPQ9BS86 351 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 KCNIP1Q9NZI2 227 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 ASPMQ8IZT6 3477 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 OR5H1A6NKK0 313 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 NPIPB11E5RHQ5 1161 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 OR3A1P47881 315 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 SLC10A1Q14973 349 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 SPINK9Q5DT21 86 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 FBXW9Q5XUX1 488 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 NCR3LG1Q68D85 454 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 OR1L1Q8NH94 360 aa12.01□□□□□ -0.49
CDH1-209ENST00000566510 RNF212BA8MTL3 300 aa12□□□□□ -0.49
CDH1-209ENST00000566510 RAC2P15153 192 aa12□□□□□ -0.49
CDH1-209ENST00000566510 IL2RGP31785 369 aa12□□□□□ -0.49
CDH1-209ENST00000566510 PPP1CBP62140 327 aa12□□□□□ -0.49
CDH1-209ENST00000566510 MEF2BQ02080 365 aaPredicted RBP12□□□□□ -0.49
CDH1-209ENST00000566510 PEAR1Q5VY43 1037 aaPredicted RBP12□□□□□ -0.49
CDH1-209ENST00000566510 BTNL3Q6UXE8 466 aa12□□□□□ -0.49
CDH1-209ENST00000566510 BCL2L2Q92843 193 aaPredicted RBP12□□□□□ -0.49
CDH1-209ENST00000566510 IER2Q9BTL4 223 aa12□□□□□ -0.49
CDH1-209ENST00000566510 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
CDH1-209ENST00000566510 TMEM242Q9NWH2 141 aa12□□□□□ -0.49
CDH1-209ENST00000566510 TREM2Q9NZC2 230 aa12□□□□□ -0.49
CDH1-209ENST00000566510 GAB2Q9UQC2 676 aa12□□□□□ -0.49
CDH1-209ENST00000566510 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
CDH1-209ENST00000566510 ZNF729A6NN14 1252 aaPredicted RBP12□□□□□ -0.49
CDH1-209ENST00000566510 PTBP3O95758 552 aaKnown RBP12□□□□□ -0.49
CDH1-209ENST00000566510 OPN1MWP04001 364 aa12□□□□□ -0.49
CDH1-209ENST00000566510 TFF1P04155 84 aa12□□□□□ -0.49
CDH1-209ENST00000566510 OPN1MW2P0DN77 364 aa12□□□□□ -0.49
CDH1-209ENST00000566510 OPN1MW3P0DN78 364 aa12□□□□□ -0.49
CDH1-209ENST00000566510 DEFA6Q01524 100 aa12□□□□□ -0.49
CDH1-209ENST00000566510 TMEM241Q24JQ0 296 aa12□□□□□ -0.49
CDH1-209ENST00000566510 Q8IYB0 196 aa12□□□□□ -0.49
CDH1-209ENST00000566510 LINC00469Q8N7U9 141 aa12□□□□□ -0.49
CDH1-209ENST00000566510 OR52L2PQ8NGH6 319 aa12□□□□□ -0.49
CDH1-209ENST00000566510 GALMQ96C23 342 aa12□□□□□ -0.49
CDH1-209ENST00000566510 CDH20Q9HBT6 801 aa12□□□□□ -0.49
CDH1-209ENST00000566510 GFOD1Q9NXC2 390 aa12□□□□□ -0.49
CDH1-209ENST00000566510 PSPNO60542 156 aa11.99□□□□□ -0.49
CDH1-209ENST00000566510 PSMB3P49720 205 aa11.99□□□□□ -0.49
CDH1-209ENST00000566510 RND2P52198 227 aa11.99□□□□□ -0.49
CDH1-209ENST00000566510 CD81P60033 236 aa11.99□□□□□ -0.49
CDH1-209ENST00000566510 PMP22Q01453 160 aa11.99□□□□□ -0.49
CDH1-209ENST00000566510 AESQ08117 197 aa11.99□□□□□ -0.49
CDH1-209ENST00000566510 MRPL49Q13405 166 aaKnown RBP11.99□□□□□ -0.49
CDH1-209ENST00000566510 TMEM164Q5U3C3 297 aa11.99□□□□□ -0.49
CDH1-209ENST00000566510 C1orf210Q8IVY1 113 aa11.99□□□□□ -0.49
CDH1-209ENST00000566510 OR5T1Q8NG75 326 aa11.99□□□□□ -0.49
CDH1-209ENST00000566510 OR4F5Q8NH21 305 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms