RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TMEM104Q8NE00 496 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 FAM3DQ96BQ1 224 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 GNG12Q9UBI6 72 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 DAPK2Q9UIK4 370 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 LSM4Q9Y4Z0 139 aaKnown RBP12.94□□□□□ -0.34
TSR3-202ENST00000566296 HUWE1Q7Z6Z7 4374 aaKnown RBP12.93□□□□□ -0.34
TSR3-202ENST00000566296 SPINT2O43291 252 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 IGHG4P01861 327 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 GTF2F2P13984 249 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 RORCP51449 518 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 SCAND1P57086 179 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 CFHR3Q02985 330 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 SPCS2Q15005 226 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 P2RY14Q15391 338 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 C6orf183Q5T699 404 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 ZNF497Q6ZNH5 498 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 KCNG3Q8TAE7 436 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 ST6GALNAC6Q969X2 333 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 HSPB9Q9BQS6 159 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 SPACA1Q9HBV2 294 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 BATF3Q9NR55 127 aa12.93□□□□□ -0.34
TSR3-202ENST00000566296 SLC31A2O15432 143 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 CRTAPO75718 401 aaPredicted RBP12.92□□□□□ -0.34
TSR3-202ENST00000566296 SLC2A2P11168 524 aaPredicted RBP12.92□□□□□ -0.34
TSR3-202ENST00000566296 ZNF137PP52743 207 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 CLDN12P56749 244 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 FHL3Q13643 280 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 ZNF260Q3ZCT1 412 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 IDNKQ5T6J7 187 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 SLC25A48Q6ZT89 311 aaKnown RBP12.92□□□□□ -0.34
TSR3-202ENST00000566296 FAM71E2Q8N5Q1 922 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 OR10V1Q8NGI7 309 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
TSR3-202ENST00000566296 DGCR14Q96DF8 476 aaKnown RBP12.92□□□□□ -0.34
TSR3-202ENST00000566296 PLSCR3Q9NRY6 295 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 ABRACLQ9P1F3 81 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 ZNF107Q9UII5 783 aaPredicted RBP12.92□□□□□ -0.34
TSR3-202ENST00000566296 ZNF580Q9UK33 172 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 TRAPPC2LQ9UL33 140 aa12.92□□□□□ -0.34
TSR3-202ENST00000566296 ZNF256Q9Y2P7 627 aaPredicted RBP12.92□□□□□ -0.34
TSR3-202ENST00000566296 STAB2Q8WWQ8 2551 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 A0A1W2PP11 408 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 ZNF736B4DX44 427 aaPredicted RBP12.91□□□□□ -0.34
TSR3-202ENST00000566296 C12orf77C9JDV5 145 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 LY86O95711 162 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 MT-ND4P03905 459 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 MGMTP16455 207 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 QRFPP83859 136 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 MMDQ15546 238 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 C2orf76Q3KRA6 126 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 FAM53AQ6NSI3 398 aaPredicted RBP12.91□□□□□ -0.34
TSR3-202ENST00000566296 TRAT1Q6PIZ9 186 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 OR11H1Q8NG94 326 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 AP3S1Q92572 193 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 ASCL2Q99929 193 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 ETAA1Q9NY74 926 aa12.91□□□□□ -0.34
TSR3-202ENST00000566296 A6NHS1 94 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 TMEM14DPA8MWL7 114 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 MCRIP1C9JLW8 97 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 C3orf84H3BNL1 204 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 LDLRAD4O15165 306 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 IGF1P05019 195 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 OR8U8P0C7N1 319 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 ZNF182P17025 639 aaPredicted RBP12.9□□□□□ -0.34
TSR3-202ENST00000566296 PSMB8P28062 276 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 INSL3P51460 131 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 F2RL1P55085 397 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 LSAMPQ13449 338 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 NKAPLQ5M9Q1 402 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 TMEM65Q6PI78 240 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 PRR18Q8N4B5 295 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 ZNF439Q8NDP4 499 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 DYNC2LI1Q8TCX1 351 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 ACOT12Q8WYK0 555 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 FAM46BQ96A09 425 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 PTX4Q96A99 478 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 URM1Q9BTM9 101 aaKnown RBP12.9□□□□□ -0.34
TSR3-202ENST00000566296 TMEM59Q9BXS4 323 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 SELENOIQ9C0D9 397 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 CCDC59Q9P031 241 aaKnown RBP12.9□□□□□ -0.34
TSR3-202ENST00000566296 RCC2Q9P258 522 aaKnown RBP12.9□□□□□ -0.34
TSR3-202ENST00000566296 ETV7Q9Y603 341 aa12.9□□□□□ -0.34
TSR3-202ENST00000566296 DYNC2H1Q8NCM8 4307 aaKnown RBP12.89□□□□□ -0.35
TSR3-202ENST00000566296 TMEM272A0A1B0GTI8 110 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 FAM90A10PA6NDY2 464 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 FAM90A7PA6NKC0 464 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 FAM90A23PA8MXZ1 464 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 HBZP02008 142 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 RAB6AP20340 208 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 CHATP28329 748 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 RPS27AP62979 156 aaKnown RBP12.89□□□□□ -0.35
TSR3-202ENST00000566296 UNC119Q13432 240 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 OR10K2Q6IF99 312 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 OR4K15Q8NH41 348 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 Q96M66 194 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 KCNK15Q9H427 330 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 BANF2Q9H503 90 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 RAB22AQ9UL26 194 aa12.89□□□□□ -0.35
TSR3-202ENST00000566296 A0A0B4J203 849 aa12.88□□□□□ -0.35
TSR3-202ENST00000566296 LANCL1O43813 399 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms