RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 VSIRQ9H7M9 311 aa2.55□□□□□ -2
CHD9-216ENST00000565803 TAF9BQ9HBM6 251 aa2.55□□□□□ -2
CHD9-216ENST00000565803 TMEM38BQ9NVV0 291 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ARMCX1Q9P291 453 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ST3GAL6Q9Y274 331 aa2.55□□□□□ -2
CHD9-216ENST00000565803 CARHSP1Q9Y2V2 147 aaKnown RBP2.55□□□□□ -2
CHD9-216ENST00000565803 OR51B2Q9Y5P1 312 aa2.55□□□□□ -2
CHD9-216ENST00000565803 PCM1Q15154 2024 aa2.55□□□□□ -2
CHD9-216ENST00000565803 DHRS12A0PJE2 317 aa2.55□□□□□ -2
CHD9-216ENST00000565803 TMEM72A0PK05 275 aa2.55□□□□□ -2
CHD9-216ENST00000565803 OR4C45A6NMZ5 311 aa2.55□□□□□ -2
CHD9-216ENST00000565803 K7EMT4 169 aa2.55□□□□□ -2
CHD9-216ENST00000565803 PHOX2AO14813 284 aa2.55□□□□□ -2
CHD9-216ENST00000565803 BCL2L11O43521 198 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF354AO60765 605 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 NTN1O95631 604 aa2.55□□□□□ -2
CHD9-216ENST00000565803 NUDT14O95848 222 aa2.55□□□□□ -2
CHD9-216ENST00000565803 FGF2P09038 288 aa2.55□□□□□ -2
CHD9-216ENST00000565803 PGA4P0DJD7 388 aa2.55□□□□□ -2
CHD9-216ENST00000565803 PGA3P0DJD8 388 aa2.55□□□□□ -2
CHD9-216ENST00000565803 LOXP28300 417 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 GABRA2P47869 451 aa2.55□□□□□ -2
CHD9-216ENST00000565803 EVX1P49640 407 aa2.55□□□□□ -2
CHD9-216ENST00000565803 WNT4P56705 351 aa2.55□□□□□ -2
CHD9-216ENST00000565803 FKBP3Q00688 224 aaKnown RBP2.55□□□□□ -2
CHD9-216ENST00000565803 IAH1Q2TAA2 248 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF284Q2VY69 593 aa2.55□□□□□ -2
CHD9-216ENST00000565803 SP5Q6BEB4 398 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 TOMM20LQ6UXN7 152 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF620Q6ZNG0 422 aa2.55□□□□□ -2
CHD9-216ENST00000565803 SLC25A48Q6ZT89 311 aaKnown RBP2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF695Q8IW36 515 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF440Q8IYI8 595 aa2.55□□□□□ -2
CHD9-216ENST00000565803 IQCF1Q8N6M8 205 aa2.55□□□□□ -2
CHD9-216ENST00000565803 NEIL3Q8TAT5 605 aa2.55□□□□□ -2
CHD9-216ENST00000565803 SYNPRQ8TBG9 265 aa2.55□□□□□ -2
CHD9-216ENST00000565803 NKX6-2Q9C056 277 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF703Q9H7S9 590 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 PRTFDC1Q9NRG1 225 aa2.55□□□□□ -2
CHD9-216ENST00000565803 PLSCR3Q9NRY6 295 aa2.55□□□□□ -2
CHD9-216ENST00000565803 NTMQ9P121 344 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ENPP4Q9Y6X5 453 aa2.55□□□□□ -2
CHD9-216ENST00000565803 USP9XQ93008 2570 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 AKAP9Q99996 3911 aa2.55□□□□□ -2
CHD9-216ENST00000565803 DOCK5Q9H7D0 1870 aa2.54□□□□□ -2
CHD9-216ENST00000565803 BORCS7-ASMTA0A0B4J1R7 106 aa2.54□□□□□ -2
CHD9-216ENST00000565803 RBFOX2O43251 390 aaKnown RBP eCLIP2.54□□□□□ -2
CHD9-216ENST00000565803 GADD45GO95257 159 aa2.54□□□□□ -2
CHD9-216ENST00000565803 RPL7P18124 248 aaKnown RBP2.54□□□□□ -2
CHD9-216ENST00000565803 KIR2DS2P43631 304 aa2.54□□□□□ -2
CHD9-216ENST00000565803 PSMB2P49721 201 aa2.54□□□□□ -2
CHD9-216ENST00000565803 RPL18AQ02543 176 aaKnown RBP2.54□□□□□ -2
CHD9-216ENST00000565803 ADIGQ0VDE8 80 aa2.54□□□□□ -2
CHD9-216ENST00000565803 FAM106AQ4KMX7 169 aa2.54□□□□□ -2
CHD9-216ENST00000565803 PYCR3Q53H96 274 aa2.54□□□□□ -2
CHD9-216ENST00000565803 TTC32Q5I0X7 151 aa2.54□□□□□ -2
CHD9-216ENST00000565803 HRCT1Q6UXD1 115 aa2.54□□□□□ -2
CHD9-216ENST00000565803 B3GNT8Q7Z7M8 397 aa2.54□□□□□ -2
CHD9-216ENST00000565803 UMODL1-AS1Q8N2C9 162 aa2.54□□□□□ -2
CHD9-216ENST00000565803 GDPD1Q8N9F7 314 aa2.54□□□□□ -2
CHD9-216ENST00000565803 ZNF740Q8NDX6 193 aa2.54□□□□□ -2
CHD9-216ENST00000565803 APOBEC4Q8WW27 367 aaKnown RBP2.54□□□□□ -2
CHD9-216ENST00000565803 SLC25A38Q96DW6 304 aa2.54□□□□□ -2
CHD9-216ENST00000565803 NAA38Q9BRA0 125 aaKnown RBP2.54□□□□□ -2
CHD9-216ENST00000565803 NDFIP1Q9BT67 221 aa2.54□□□□□ -2
CHD9-216ENST00000565803 THTPAQ9BU02 230 aa2.54□□□□□ -2
CHD9-216ENST00000565803 ZNF556Q9HAH1 456 aa2.54□□□□□ -2
CHD9-216ENST00000565803 RBFOX1Q9NWB1 397 aaKnown RBP2.54□□□□□ -2
CHD9-216ENST00000565803 COMMD3Q9UBI1 195 aa2.54□□□□□ -2
CHD9-216ENST00000565803 RSL24D1Q9UHA3 163 aaKnown RBP2.54□□□□□ -2
CHD9-216ENST00000565803 PXMP4Q9Y6I8 212 aa2.54□□□□□ -2
CHD9-216ENST00000565803 WDR87Q6ZQQ6 2873 aa2.54□□□□□ -2
CHD9-216ENST00000565803 SAA2-SAA4A0A096LPE2 208 aa2.54□□□□□ -2
CHD9-216ENST00000565803 hADV38S2A0JD32 116 aa2.54□□□□□ -2
CHD9-216ENST00000565803 NKX2-6A6NCS4 301 aa2.54□□□□□ -2
CHD9-216ENST00000565803 PRR32B1ATL7 298 aa2.54□□□□□ -2
CHD9-216ENST00000565803 B4DEV8 164 aa2.54□□□□□ -2
CHD9-216ENST00000565803 E9PLD3 99 aa2.54□□□□□ -2
CHD9-216ENST00000565803 J3QT63 122 aa2.54□□□□□ -2
CHD9-216ENST00000565803 PIRO00625 290 aa2.54□□□□□ -2
CHD9-216ENST00000565803 APOC3P02656 99 aa2.54□□□□□ -2
CHD9-216ENST00000565803 ZSCAN5DPP0CG00 497 aa2.54□□□□□ -2
CHD9-216ENST00000565803 GKN3PP0CG01 181 aa2.54□□□□□ -2
CHD9-216ENST00000565803 ORM2P19652 201 aa2.54□□□□□ -2
CHD9-216ENST00000565803 HTR1EP28566 365 aa2.54□□□□□ -2
CHD9-216ENST00000565803 CXCL12P48061 93 aa2.54□□□□□ -2
CHD9-216ENST00000565803 LHX2P50458 406 aa2.54□□□□□ -2
CHD9-216ENST00000565803 FABP6P51161 128 aa2.54□□□□□ -2
CHD9-216ENST00000565803 TDGF1P3P51864 188 aa2.54□□□□□ -2
CHD9-216ENST00000565803 SEC61BP60468 96 aaKnown RBP2.54□□□□□ -2
CHD9-216ENST00000565803 RPS25P62851 125 aaKnown RBP2.54□□□□□ -2
CHD9-216ENST00000565803 GNGT1P63211 74 aa2.54□□□□□ -2
CHD9-216ENST00000565803 HOXA4Q00056 320 aaPredicted RBP2.54□□□□□ -2
CHD9-216ENST00000565803 ZNF154Q13106 437 aa2.54□□□□□ -2
CHD9-216ENST00000565803 EBPQ15125 230 aaKnown RBP2.54□□□□□ -2
CHD9-216ENST00000565803 RGNQ15493 299 aa2.54□□□□□ -2
CHD9-216ENST00000565803 TIGITQ495A1 244 aa2.54□□□□□ -2
CHD9-216ENST00000565803 LRRC10Q5BKY1 277 aa2.54□□□□□ -2
CHD9-216ENST00000565803 TMEM255AQ5JRV8 349 aa2.54□□□□□ -2
CHD9-216ENST00000565803 ZNF324BQ6AW86 544 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms