RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 MAP2K4P45985 399 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 FABP5Q01469 135 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 KIAA0141Q14154 515 aaPredicted RBP12.23□□□□□ -0.45
CDH3-204ENST00000565453 C5orf64Q2M2E5 130 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 OR8U1Q8NH10 309 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 SETD6Q8TBK2 473 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 DPF1Q92782 380 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 CHCHD6Q9BRQ6 235 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 AGMATQ9BSE5 352 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 URM1Q9BTM9 101 aaKnown RBP12.23□□□□□ -0.45
CDH3-204ENST00000565453 OR51J1Q9H342 316 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 PLGRKTQ9HBL7 147 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 PIPOXQ9P0Z9 390 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 STEAP1Q9UHE8 339 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 SLC23A1Q9UHI7 598 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 G3V318 75 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 RAB29O14966 203 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 LDLRAD4O15165 306 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 ATP6V0E1O15342 81 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 ARL6IP5O75915 188 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 CT45A6P0DMU7 189 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 CT45A5P0DMU8 189 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 CT45A7P0DMV0 189 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 HLA-DRB3P79483 266 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 FHL3Q13643 280 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 RAB11BQ15907 218 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 RPL39P5Q59GN2 51 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 C4orf3Q8WVX3 66 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 MGLLQ99685 303 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 KLK15Q9H2R5 256 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 OR1A1Q9P1Q5 309 aa12.22□□□□□ -0.45
CDH3-204ENST00000565453 IGLV1-40P01703 118 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 CALRP27797 417 aaKnown RBP12.21□□□□□ -0.45
CDH3-204ENST00000565453 CLDN12P56749 244 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 C19orf54Q5BKX5 351 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 FAM131AQ6UXB0 335 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 GLDNQ6ZMI3 551 aaPredicted RBP12.21□□□□□ -0.45
CDH3-204ENST00000565453 ARHGAP5-AS1Q96IT6 56 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 ABHD14BQ96IU4 210 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 PECRQ9BY49 303 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 CCDC90BQ9GZT6 254 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 Q9N2K0 584 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 WSB1Q9Y6I7 421 aa12.21□□□□□ -0.45
CDH3-204ENST00000565453 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 OR5H14A6NHG9 310 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 H0YJW9 148 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 PROP1O75360 226 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 SCTP09683 121 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 VEGFCP49767 419 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 CRIP2P52943 208 aaPredicted RBP12.2□□□□□ -0.46
CDH3-204ENST00000565453 NDPQ00604 133 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 PLA2G7Q13093 441 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 TBCEQ15813 527 aaPredicted RBP12.2□□□□□ -0.46
CDH3-204ENST00000565453 SSX1Q16384 188 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 C2orf76Q3KRA6 126 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 PLAC9Q5JTB6 97 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 LIN54Q6MZP7 749 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 ZNF491Q8N8L2 437 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 OR5AN1Q8NGI8 311 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 OR5M8Q8NGP6 311 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 PTX4Q96A99 478 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 FAM3DQ96BQ1 224 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 C11orf54Q9H0W9 315 aaPredicted RBP12.2□□□□□ -0.46
CDH3-204ENST00000565453 GNB4Q9HAV0 340 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 ACOT13Q9NPJ3 140 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 C12orf4Q9NQ89 552 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 PARP11Q9NR21 331 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 MGAT4AQ9UM21 535 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 FBXO7Q9Y3I1 522 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 V9GY05 133 aa12.2□□□□□ -0.46
CDH3-204ENST00000565453 TRAV41A0A0B4J266 112 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 SHISA3A0PJX4 238 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 CEACAM6P40199 344 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 LUMP51884 338 aaPredicted RBP12.19□□□□□ -0.46
CDH3-204ENST00000565453 RAB25P57735 213 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 DGCR2P98153 550 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 RUNX1Q01196 453 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 ASPHD1Q5U4P2 390 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 IZUMO2Q6UXV1 221 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 MINDY2Q8NBR6 621 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 UBE2E2Q96LR5 201 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 VCX3BQ9H321 246 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 GHITMQ9H3K2 345 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 KIAA1456Q9P272 454 aa12.19□□□□□ -0.46
CDH3-204ENST00000565453 TMEM272A0A1B0GTI8 110 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 I3L521 148 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 RRHO14718 337 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 ZBTB25P24278 435 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 MC5RP33032 325 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 HES5Q5TA89 166 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 ZNF367Q7RTV3 350 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 OR11H1Q8NG94 326 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 OR56B1Q8NGI3 324 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 EDARADDQ8WWZ3 215 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 CNBD2Q96M20 576 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 CMSS1Q9BQ75 279 aaKnown RBP12.18□□□□□ -0.46
CDH3-204ENST00000565453 FBXL15Q9H469 300 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 KCNK7Q9Y2U2 307 aa12.18□□□□□ -0.46
CDH3-204ENST00000565453 WASHC3Q9Y3C0 194 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms