RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 TENM2Q9NT68 2774 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 RYR2Q92736 4967 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 PTGES3LE9PB15 166 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 C3orf84H3BNL1 204 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 PROP1O75360 226 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 NAPSAO96009 420 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 CT45A6P0DMU7 189 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 CT45A5P0DMU8 189 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 CT45A7P0DMV0 189 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 SNRPBP14678 240 aaKnown RBP6.63□□□□□ -1.35
CAPN3-213ENST00000565173 HTR2CP28335 458 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 WNT4P56705 351 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 CX3CL1P78423 397 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 QRFPP83859 136 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 FAM27D1Q5T7N8 215 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 ZNF660Q6AZW8 331 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-213ENST00000565173 C6orf201Q7Z4U5 140 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 LRRTM1Q86UE6 522 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 ZNF429Q86V71 674 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 SBSPONQ8IVN8 264 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 NANOGP1Q8N7R0 232 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 NKAIN3Q8N8D7 197 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 CASTOR1Q8WTX7 329 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 AGMATQ9BSE5 352 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 FAAP24Q9BTP7 215 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 TOLLIPQ9H0E2 274 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 TPRKBQ9Y3C4 175 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 SMAD5-AS1Q9Y6J3 95 aa6.63□□□□□ -1.35
CAPN3-213ENST00000565173 A0A0A6YYD4 124 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 RRHO14718 337 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 OVOL1O14753 267 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 MYL12BO14950 172 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 ST8SIA5O15466 376 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 RGS11O94810 467 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 CDK1P06493 297 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 SLURP1P55000 103 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 RPS27AP62979 156 aaKnown RBP6.62□□□□□ -1.35
CAPN3-213ENST00000565173 UNC119Q13432 240 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 ACSM3Q53FZ2 586 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 RPL39P5Q59GN2 51 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 C1orf100Q5SVJ3 147 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 FAM71F2Q6NXP2 309 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 ACSM6Q6P461 480 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 CD200R1LQ6Q8B3 271 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 FAM131AQ6UXB0 335 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 GLDNQ6ZMI3 551 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-213ENST00000565173 SVOPQ8N4V2 548 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 OR2AK2Q8NG84 335 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 OR5AN1Q8NGI8 311 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 NICN1Q9BSH3 213 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 TM2D1Q9BX74 207 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 PARP12Q9H0J9 701 aaKnown RBP6.62□□□□□ -1.35
CAPN3-213ENST00000565173 CST11Q9H112 138 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 KCNK15Q9H427 330 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 FBXL15Q9H469 300 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 FKBP14Q9NWM8 211 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 PIPOXQ9P0Z9 390 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 SLC23A1Q9UHI7 598 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 GAB2Q9UQC2 676 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 SORL1Q92673 2214 aa6.62□□□□□ -1.35
CAPN3-213ENST00000565173 IGHV4OR15-8A0A075B7B6 117 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 A0A087WW49 117 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 A0A1W2PN81 502 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 TMEM14DPA8MWL7 114 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 LINC01619G3V211 115 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 H0YJW9 148 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 ITGB1BP1O14713 200 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 RAB29O14966 203 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 SLC22A1O15245 554 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 DENRO43583 198 aaKnown RBP6.61□□□□□ -1.35
CAPN3-213ENST00000565173 LY86O95711 162 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 UBBP0CG47 229 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 SPNP16150 400 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 SRMP19623 302 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 CRHBPP24387 322 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 MAPK3P27361 379 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-213ENST00000565173 CHRNA7P36544 502 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 LINC00205P59089 165 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 ECSCRQ19T08 205 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 AKIRIN2Q53H80 203 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 RBM48Q5RL73 367 aaKnown RBP6.61□□□□□ -1.35
CAPN3-213ENST00000565173 CASC10Q5T4H9 136 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 RNLSQ5VYX0 342 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 FAM89BQ8N5H3 189 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 MUC7Q8TAX7 377 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 IL1F10Q8WWZ1 152 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 PHYHIPQ92561 330 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 THRSPQ92748 146 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 ABHD14BQ96IU4 210 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 RHOVQ96L33 236 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 NEDD4LQ96PU5 975 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 CCDC90BQ9GZT6 254 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 C11orf54Q9H0W9 315 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-213ENST00000565173 ISYNA1Q9NPH2 558 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 KIAA1456Q9P272 454 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 STEAP1Q9UHE8 339 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 BLOC1S6Q9UL45 172 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 FOXA2Q9Y261 457 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-213ENST00000565173 ERGIC3Q9Y282 383 aa6.61□□□□□ -1.35
CAPN3-213ENST00000565173 STARD9Q9P2P6 4700 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms