RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 ALKBH6Q3KRA9 238 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 FAM53AQ6NSI3 398 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 SSX9Q7RTT3 188 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 C1orf210Q8IVY1 113 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 PSMG3Q9BT73 122 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 WDR61Q9GZS3 305 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 TMEM9BQ9NQ34 198 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 LIN7CQ9NUP9 197 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 ABI3Q9P2A4 366 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 GPR179Q6PRD1 2367 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 OR8G2PQ6IF36 304 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 ABHD5Q8WTS1 349 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 RTL8AQ9BWD3 113 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 OR2J1Q9GZK6 312 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 DEFB127Q9H1M4 99 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 RNF150Q9ULK6 438 aa13.06□□□□□ -0.32
GTF3C1-205ENST00000564747 CEBPZOSA8MTT3 80 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 CEBPDP49716 269 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 ERVK11-1P61568 191 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 SERF2P84101 59 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 C4orf17Q53FE4 359 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 MOB1BQ7L9L4 216 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 SSX3Q99909 188 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 DDA1Q9BW61 102 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 UBE2L5PA0A1B0GUS4 154 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 TSTD3H0UI37 97 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 NXPH2O95156 264 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 CD81P60033 236 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 TLE1Q04724 770 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 DNLZQ5SXM8 178 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 FBXW9Q5XUX1 488 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 SDF2L1Q9HCN8 221 aa13.05□□□□□ -0.32
GTF3C1-205ENST00000564747 CLDN34H7C241 214 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 RAMP3O60896 148 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 SP1P08047 785 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 PKIAP61925 76 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 HOXA4Q00056 320 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 PNRC1Q12796 327 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 TAF15Q92804 592 aaKnown RBP eCLIP13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 PACRGQ96M98 296 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 RBKSQ9H477 322 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 MBNL3Q9NUK0 354 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 IL17BQ9UHF5 180 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 USF3Q68DE3 2245 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 LOC400499M0QZD8 3231 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 MAP1LC3B2A6NCE7 125 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 CYB5R3P00387 301 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 IGKV1D-33P01593 117 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 IGKV1-33P01594 117 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 GRPP07492 148 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 CD55P08174 381 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 DDTP30046 118 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 TMEM41BQ5BJD5 291 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 RPP25LQ8N5L8 163 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 MEGF10Q96KG7 1140 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 MAP1LC3BQ9GZQ8 125 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 VAX2Q9UIW0 290 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 DOCK11Q5JSL3 2073 aa13.04□□□□□ -0.32
GTF3C1-205ENST00000564747 A0A1B0GV90 55 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 HMGB3O15347 200 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 TGOLN2O43493 480 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 CLDN1O95832 211 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 SLC38A11Q08AI6 406 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 SLC10A1Q14973 349 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 TMEM242Q9NWH2 141 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 KRASP01116 189 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 TBC1D28Q2M2D7 210 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 REC114Q7Z4M0 266 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 MRGPRGQ86SM5 289 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 WDYHV1Q96HA8 205 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 SNX22Q96L94 193 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 GPR87Q9BY21 358 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 PRO1933Q9H354 126 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 POLDIP2Q9Y2S7 368 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 WIPI2Q9Y4P8 454 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 DSPP15924 2871 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 A0A087X0M5 115 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 A0A1B0GX30 115 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 SH2D1BO14796 132 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 PSPNO60542 156 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 ZNF737O75373 536 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 PGA5P0DJD9 388 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 MDKP21741 143 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 G6PCP35575 357 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 RND2P52198 227 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 PPP1CBP62140 327 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 TNFRSF9Q07011 255 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 ZNF146Q15072 292 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 DBX2Q6ZNG2 339 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 Q8IYB0 196 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 OR1L1Q8NH94 360 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 NANOS1Q8WY41 292 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 SLC39A9Q9NUM3 307 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 NCOR1O75376 2440 aa13.03□□□□□ -0.32
GTF3C1-205ENST00000564747 SMCO3A2RU48 225 aa13.02□□□□□ -0.32
GTF3C1-205ENST00000564747 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.32
GTF3C1-205ENST00000564747 SMPD2O60906 423 aa13.02□□□□□ -0.32
GTF3C1-205ENST00000564747 IDH3GP51553 393 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms