RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ERGIC3Q9Y282 383 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 NUBP2Q9Y5Y2 271 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 HERC1Q15751 4861 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 A0A1W2PP11 408 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 FCN1O00602 326 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 RGS10O43665 173 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 LANCL1O43813 399 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 RGS11O94810 467 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 HSPB1P04792 205 aaKnown RBP7.85□□□□□ -1.15
SF3B3-204ENST00000563739 TMEM225BP0DP42 221 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 KCNJ3P48549 501 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 TAS2R43P59537 309 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 IRF3Q14653 427 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 NHLRC3Q5JS37 347 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 DMKNQ6E0U4 476 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-204ENST00000563739 TMEM65Q6PI78 240 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 ZNF497Q6ZNH5 498 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 PRSS48Q7RTY5 328 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 CLVS1Q8IUQ0 354 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-204ENST00000563739 GAPTQ8N292 157 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 NANOGP1Q8N7R0 232 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 ZFP41Q8N8Y5 198 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 NPBQ8NG41 125 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 OR10V1Q8NGI7 309 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 OR13C3Q8NGS6 347 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 OR1L1Q8NH94 360 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 TSEN15Q8WW01 171 aaKnown RBP7.85□□□□□ -1.15
SF3B3-204ENST00000563739 MUL1Q969V5 352 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 BARHL1Q9BZE3 327 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 CCDC90BQ9GZT6 254 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 PTTG2Q9NZH5 202 aa7.85□□□□□ -1.15
SF3B3-204ENST00000563739 FOXA2Q9Y261 457 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-204ENST00000563739 MRPS28Q9Y2Q9 187 aaKnown RBP7.85□□□□□ -1.15
SF3B3-204ENST00000563739 LSM2Q9Y333 95 aaKnown RBP7.85□□□□□ -1.15
SF3B3-204ENST00000563739 TMEM30CPA0ZSE6 113 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 GEMIN2O14893 280 aaKnown RBP7.84□□□□□ -1.15
SF3B3-204ENST00000563739 NBR2O15453 112 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 OGG1O15527 345 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 TXNL1O43396 289 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 SULT1B1O43704 296 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 ORC5O43913 435 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 RBMXL2O75526 392 aaKnown RBP7.84□□□□□ -1.15
SF3B3-204ENST00000563739 MT-ND4P03905 459 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 CSN3P07498 182 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 RBM11P57052 281 aaKnown RBP7.84□□□□□ -1.15
SF3B3-204ENST00000563739 CX3CL1P78423 397 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 DEFA5Q01523 94 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 KLF5Q13887 457 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-204ENST00000563739 CD200R1LQ6Q8B3 271 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 SVOPQ8N4V2 548 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 PARP16Q8N5Y8 322 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 CCDC107Q8WV48 283 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 PGLYRP3Q96LB9 341 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 OR4C12Q96R67 309 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 ZNF251Q9BRH9 671 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 FAM103A1Q9BTL3 118 aaKnown RBP7.84□□□□□ -1.15
SF3B3-204ENST00000563739 PLEKHA3Q9HB20 300 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 RCC2Q9P258 522 aaKnown RBP7.84□□□□□ -1.15
SF3B3-204ENST00000563739 DHDHQ9UQ10 334 aa7.84□□□□□ -1.15
SF3B3-204ENST00000563739 PNMA8CA0A1B0GUJ8 204 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 DEDDO75618 318 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 LY6G6CO95867 125 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 TRBV12-3P01733 135 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 IFNA6P05013 189 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 EDN2P20800 178 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 MAP2K4P45985 399 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 OR3A3P47888 321 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 TMBIM6P55061 237 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 TBCEQ15813 527 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-204ENST00000563739 YIF1BQ5BJH7 314 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 GPR107Q5VW38 600 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 OR13C5Q8NGS8 318 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 GPR148Q8TDV2 347 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 TNFAIP8L1Q8WVP5 186 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 GHSRQ92847 366 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 RSRP1Q9BUV0 290 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 GHITMQ9H3K2 345 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 FBXL15Q9H469 300 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 ACOT13Q9NPJ3 140 aa7.83□□□□□ -1.16
SF3B3-204ENST00000563739 TRBV5-5A0A0J9YX44 114 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 CDRT1O95170 752 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 HBZP02008 142 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 CD1AP06126 327 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 CD7P09564 240 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 OCM2P0CE71 109 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 RCC1P18754 421 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-204ENST00000563739 CELP19835 753 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 GZMHP20718 246 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 IL3RAP26951 378 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 SOX2P48431 317 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 RPS11P62280 158 aaKnown RBP eCLIP7.82□□□□□ -1.16
SF3B3-204ENST00000563739 SPHARQ15513 63 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 MED22Q15528 200 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 SYT6Q5T7P8 510 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-204ENST00000563739 UBE2UQ5VVX9 321 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 ZNF833PQ6ZTB9 187 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 FCGR1BQ92637 280 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 MS4A10Q96PG2 267 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 TMED9Q9BVK6 235 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 NAA50Q9GZZ1 169 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms