RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 STPG3Q8N7X2 389 aa8□□□□□ -1.13
CDH1-205ENST00000562836 ZNF114Q8NC26 417 aa8□□□□□ -1.13
CDH1-205ENST00000562836 OR2M3Q8NG83 312 aa8□□□□□ -1.13
CDH1-205ENST00000562836 CDX2Q99626 313 aaPredicted RBP8□□□□□ -1.13
CDH1-205ENST00000562836 RCL1Q9Y2P8 373 aaKnown RBP8□□□□□ -1.13
CDH1-205ENST00000562836 BRCA1P38398 1863 aaKnown RBP8□□□□□ -1.13
CDH1-205ENST00000562836 VDAC1P21796 283 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 ACRV1P26436 265 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 PSMB4P28070 264 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 RPL12P30050 165 aaKnown RBP7.99□□□□□ -1.13
CDH1-205ENST00000562836 PPICP45877 212 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 NUMA1Q14980 2115 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 STUMQ69YW2 141 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 CHRDL2Q6WN34 429 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 SPATA12Q7Z6I5 190 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 ZNF501Q96CX3 271 aaPredicted RBP7.99□□□□□ -1.13
CDH1-205ENST00000562836 ZMYND19Q96E35 227 aaPredicted RBP7.99□□□□□ -1.13
CDH1-205ENST00000562836 EBPLQ9BY08 206 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 RAXQ9Y2V3 346 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 SIRT4Q9Y6E7 314 aaPredicted RBP7.99□□□□□ -1.13
CDH1-205ENST00000562836 JTBO76095 146 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 ATP1B2P14415 290 aaPredicted RBP7.99□□□□□ -1.13
CDH1-205ENST00000562836 CXCL12P48061 93 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 LCN6P62502 163 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 ICAM4Q14773 271 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 RSPO2Q6UXX9 243 aaPredicted RBP7.99□□□□□ -1.13
CDH1-205ENST00000562836 ZNF683Q8IZ20 524 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 ZNF563Q8TA94 476 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 MBD3L1Q8WWY6 194 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 RPEQ96AT9 228 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 OR4C12Q96R67 309 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 LOXL2Q9Y4K0 774 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 TRAV9-2A0A087WT02 112 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 A0A1W2PS29 197 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 hADV38S2A0JD32 116 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 TMEM212A6NML5 194 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 WDR5P61964 334 aaKnown RBP7.99□□□□□ -1.13
CDH1-205ENST00000562836 LCN12Q6JVE5 192 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 CBLN3Q6UW01 205 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 B3GALNT2Q8NCR0 500 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 OR2T10Q8NGZ9 312 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 ACER1Q8TDN7 264 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 MS4A6AQ9H2W1 248 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 RETNQ9HD89 108 aa7.99□□□□□ -1.13
CDH1-205ENST00000562836 ARID2Q68CP9 1835 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 SBF1O95248 1867 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 DOCK8Q8NF50 2099 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 J3KTA2 159 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 HIST1H1DP16402 221 aaKnown RBP7.98□□□□□ -1.13
CDH1-205ENST00000562836 AQP1P29972 269 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 ADORA2A-AS1P86434 159 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 DLX2Q07687 328 aaPredicted RBP7.98□□□□□ -1.13
CDH1-205ENST00000562836 CTBP1Q13363 440 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 NR0B2Q15466 257 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 MLF2Q15773 248 aaPredicted RBP7.98□□□□□ -1.13
CDH1-205ENST00000562836 TBR1Q16650 682 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 ASTLQ6HA08 431 aaPredicted RBP7.98□□□□□ -1.13
CDH1-205ENST00000562836 DHRS13Q6UX07 377 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 BAGE2Q86Y30 109 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 LRRC25Q8N386 305 aaPredicted RBP7.98□□□□□ -1.13
CDH1-205ENST00000562836 OR51E1Q8TCB6 317 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 RAB37Q96AX2 223 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 DERL3Q96Q80 235 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 FGF20Q9NP95 211 aaPredicted RBP7.98□□□□□ -1.13
CDH1-205ENST00000562836 GPR84Q9NQS5 396 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 DUSP13Q9UII6 198 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 A0A087X0K7 114 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 A0A0J9YW62 118 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 FGF10O15520 208 aaPredicted RBP7.98□□□□□ -1.13
CDH1-205ENST00000562836 CD3DP04234 171 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 C3orf79P0CE67 100 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 RUNX3Q13761 415 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 SPANXN4Q5MJ08 99 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 ACP7Q6ZNF0 438 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 COMMD6Q7Z4G1 85 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 VN1R2Q8NFZ6 395 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 SLC35A4Q96G79 324 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 ADTRPQ96IZ2 230 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 KIR2DL4Q99706 377 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 CISHQ9NSE2 258 aa7.98□□□□□ -1.13
CDH1-205ENST00000562836 LY75O60449 1722 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 NRXN2Q9P2S2 1712 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 SCN8AQ9UQD0 1980 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 A0A1W2PPM0 123 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 A6NDN8 102 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 H3BRM9 83 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 GPR137BO60478 399 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 HSPB1P04792 205 aaKnown RBP7.97□□□□□ -1.13
CDH1-205ENST00000562836 GPX1P07203 203 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 FAM106CPP0CH98 169 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 EVI2AP22794 236 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 PRSS3P35030 304 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 KLRD1Q13241 179 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 FAM106AQ4KMX7 169 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 TMEM196Q5HYL7 178 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 C12orf73Q69YU5 71 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 MRPL54Q6P161 138 aaKnown RBP7.97□□□□□ -1.13
CDH1-205ENST00000562836 RNF144BQ7Z419 303 aa7.97□□□□□ -1.13
CDH1-205ENST00000562836 PTGR2Q8N8N7 351 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms