RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 A0A1B0GW15 77 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 A0A1B0GX12 115 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 C11orf86A6NJI1 115 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 NDUFS8O00217 210 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 GPR171O14626 319 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 IGKV2D-40P01614 121 aaPredicted RBP0.73□□□□□ -2.29
CHD9-207ENST00000562806 APOA1P02647 267 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 KCNJ3P48549 501 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 IDH3GP51553 393 aaPredicted RBP0.73□□□□□ -2.29
CHD9-207ENST00000562806 CARD18P57730 90 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 GLO1Q04760 184 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 NATD1Q8N6N6 113 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 OR8B12Q8NGG6 310 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 OR2D3Q8NGH3 330 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 CCDC12Q8WUD4 166 aaPredicted RBP0.73□□□□□ -2.29
CHD9-207ENST00000562806 CCDC127Q96BQ5 260 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 RETNLBQ9BQ08 111 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 NKX6-2Q9C056 277 aaPredicted RBP0.73□□□□□ -2.29
CHD9-207ENST00000562806 MED28Q9H204 178 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 C16orf95Q9H693 158 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 NRBP2Q9NSY0 501 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 RBMX2Q9Y388 322 aaKnown RBP0.73□□□□□ -2.29
CHD9-207ENST00000562806 ADAMTSL1Q8N6G6 1762 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 HELZ2Q9BYK8 2649 aaKnown RBP0.72□□□□□ -2.29
CHD9-207ENST00000562806 TRGV5A0A0B4J1U4 118 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 NDUFB2O95178 105 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 IGLV3-27P01718 113 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 IVLP07476 585 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 ORM2P19652 201 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 XCL1P47992 114 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 SULT1A2P50226 295 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 UBE2KP61086 200 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 BTN3A2P78410 334 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 DEFA6Q01524 100 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 OR4D1Q15615 310 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 TBC1D28Q2M2D7 210 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 FBXO48Q5FWF7 155 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 TMEM42Q69YG0 159 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 SCGB1D4Q6XE38 83 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 SLC35E3Q7Z769 313 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 SLC13A5Q86YT5 568 aaPredicted RBP0.72□□□□□ -2.29
CHD9-207ENST00000562806 YIPF7Q8N8F6 280 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 SLC35G5Q96KT7 338 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 TRNT1Q96Q11 434 aaKnown RBP0.72□□□□□ -2.29
CHD9-207ENST00000562806 GLS2Q9UI32 602 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.72□□□□□ -2.29
CHD9-207ENST00000562806 AMMECR1Q9Y4X0 333 aaPredicted RBP0.72□□□□□ -2.29
CHD9-207ENST00000562806 KMT2BQ9UMN6 2715 aaPredicted RBP0.72□□□□□ -2.29
CHD9-207ENST00000562806 PLCH2O75038 1416 aa0.72□□□□□ -2.29
CHD9-207ENST00000562806 OR5K4A6NMS3 321 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 F5H5K5 113 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 ZW10O43264 779 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 IGHV1-69P01742 117 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 ZNF705DP0CH99 300 aaPredicted RBP0.71□□□□□ -2.3
CHD9-207ENST00000562806 ZNF705BP0CI00 300 aaPredicted RBP0.71□□□□□ -2.3
CHD9-207ENST00000562806 CCL2P13500 99 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 AGTR1P30556 359 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 CD79BP40259 229 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 CRATP43155 626 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 RAB31Q13636 194 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 CLEC12BQ2HXU8 276 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 OR10J3Q5JRS4 329 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 AMTNQ6UX39 209 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 DOLPP1Q86YN1 238 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 CCDC112Q8NEF3 446 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 SMIM12Q96EX1 92 aa0.71□□□□□ -2.3
CHD9-207ENST00000562806 DNMT1P26358 1616 aaKnown RBP0.71□□□□□ -2.3
CHD9-207ENST00000562806 MAP3K19Q56UN5 1328 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 NCKAP5O14513 1909 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 IGHV3-64A0A075B6Q5 118 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 IGKV3D-7A0A0C4DH55 119 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 IGKV3OR2-268A0A0C4DH90 116 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 C9J4A7 227 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 COPEO14579 308 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 UBE2L6O14933 153 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 SGCEO43556 437 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 SYNGR1O43759 233 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 ZNF728P0DKX0 622 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 ALDH3A1P30838 453 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 RPL14P50914 215 aaKnown RBP0.7□□□□□ -2.3
CHD9-207ENST00000562806 STC1P52823 247 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 EMP1P54849 157 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 ACTBP60709 375 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 RAB8AP61006 207 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 TMEM258P61165 79 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 DAD1P61803 113 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 ACTG1P63261 375 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 RPS19BP1Q86WX3 136 aaKnown RBP0.7□□□□□ -2.3
CHD9-207ENST00000562806 TMEM75Q8N9X5 138 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 SPACA4Q8TDM5 124 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 TNFAIP8L1Q8WVP5 186 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 FGF13Q92913 245 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 LRRC39Q96DD0 335 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 OR7D2Q96RA2 312 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 MS4A12Q9NXJ0 267 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 HHLA3Q9XRX5 114 aa0.7□□□□□ -2.3
CHD9-207ENST00000562806 ARHGAP32A7KAX9 2087 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 NUP153P49790 1475 aaKnown RBP0.69□□□□□ -2.3
CHD9-207ENST00000562806 TMSB15BA0A087X1C1 80 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 A0A1B0GVG6 124 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 391.1 ms