RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 OPN1MW2P0DN77 364 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 OPN1MW3P0DN78 364 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 ZNF146Q15072 292 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 PDZD11Q5EBL8 140 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 FBXW9Q5XUX1 488 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 OR8G2PQ6IF36 304 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 VASH2Q86V25 355 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 RPP25LQ8N5L8 163 aaKnown RBP18.35■□□□□ 0.53
LINC00565-201ENST00000562710 ZNF383Q8NA42 475 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 LHX4Q969G2 390 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 CTDSP1Q9GZU7 261 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 SLC39A9Q9NUM3 307 aa18.35■□□□□ 0.53
LINC00565-201ENST00000562710 NXPH2O95156 264 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 TNFRSF9Q07011 255 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 TBC1D28Q2M2D7 210 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 TIMM9Q9Y5J7 89 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 CDIPTO14735 213 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 SH2D1BO14796 132 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 CLDN1O95832 211 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 IGKV1D-33P01593 117 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 IGKV1-33P01594 117 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 PGA5P0DJD9 388 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 MEOX1P50221 254 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 LPAL2Q16609 132 aa18.34■□□□□ 0.53
LINC00565-201ENST00000562710 PHOX2AO14813 284 aa18.33■□□□□ 0.53
LINC00565-201ENST00000562710 PTBP3O95758 552 aaKnown RBP18.33■□□□□ 0.53
LINC00565-201ENST00000562710 MYPOPQ86VE0 399 aaPredicted RBP18.33■□□□□ 0.53
LINC00565-201ENST00000562710 GPR87Q9BY21 358 aa18.33■□□□□ 0.53
LINC00565-201ENST00000562710 CD81P60033 236 aa18.33■□□□□ 0.52
LINC00565-201ENST00000562710 C4orf17Q53FE4 359 aa18.33■□□□□ 0.52
LINC00565-201ENST00000562710 CENPVQ7Z7K6 275 aaPredicted RBP18.33■□□□□ 0.52
LINC00565-201ENST00000562710 OR2J1Q9GZK6 312 aa18.33■□□□□ 0.52
LINC00565-201ENST00000562710 HSPB7Q9UBY9 170 aa18.33■□□□□ 0.52
LINC00565-201ENST00000562710 FRYQ5TBA9 3013 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 OR5H1A6NKK0 313 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 GATCO43716 136 aaKnown RBP18.32■□□□□ 0.52
LINC00565-201ENST00000562710 RAMP3O60896 148 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 SP1P08047 785 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 MEF2BQ02080 365 aaPredicted RBP18.32■□□□□ 0.52
LINC00565-201ENST00000562710 C9orf152Q5JTZ5 239 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 PFDN5Q99471 154 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 SMIM7Q9BQ49 75 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 AGMATQ9BSE5 352 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 NAT8Q9UHE5 227 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 J3QW42 95 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 ZNF645Q8N7E2 425 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 LINC00469Q8N7U9 141 aa18.32■□□□□ 0.52
LINC00565-201ENST00000562710 IGHV3-64DA0A0J9YX35 117 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 SMPD2O60906 423 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 CELA3BP08861 270 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 PPP1CBP62140 327 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 GTF3C1Q12789 2109 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 C21orf140B9A014 251 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 ERVS71-1P61550 626 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 HNF4GQ14541 408 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 SLC10A1Q14973 349 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 NCR3LG1Q68D85 454 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 ACSM6Q6P461 480 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 DBX2Q6ZNG2 339 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 CYP2G1PQ6ZSU1 146 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.31■□□□□ 0.52
LINC00565-201ENST00000562710 C1orf210Q8IVY1 113 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 ZBTB34Q8NCN2 500 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 KCNIP1Q9NZI2 227 aa18.31■□□□□ 0.52
LINC00565-201ENST00000562710 KLF13Q9Y2Y9 288 aaPredicted RBP18.31■□□□□ 0.52
LINC00565-201ENST00000562710 USF3Q68DE3 2245 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 A0A1W2PNU3 283 aaPredicted RBP18.3■□□□□ 0.52
LINC00565-201ENST00000562710 KRASP01116 189 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 CD55P08174 381 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 P0C879 139 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 HIST1H1BP16401 226 aaKnown RBP18.3■□□□□ 0.52
LINC00565-201ENST00000562710 G6PCP35575 357 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 MSMO1Q15800 293 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 ADIRFQ15847 76 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 ALKBH6Q3KRA9 238 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 OR1L1Q8NH94 360 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 OR2D2Q9H210 308 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 PRDM13Q9H4Q3 707 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 CDH20Q9HBT6 801 aa18.3■□□□□ 0.52
LINC00565-201ENST00000562710 KLRC4-KLRK1H3BQV0 150 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 HAND1O96004 215 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 FABP4P15090 132 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 PLA2G5P39877 138 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 CEBPDP49716 269 aaPredicted RBP18.29■□□□□ 0.52
LINC00565-201ENST00000562710 TMEM241Q24JQ0 296 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 GALMQ96C23 342 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 PSPNO60542 156 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 KBTBD11O94819 623 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 GRPP07492 148 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 OR3A1P47881 315 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 RPL30P62888 115 aaKnown RBP18.29■□□□□ 0.52
LINC00565-201ENST00000562710 MRPL49Q13405 166 aaKnown RBP18.29■□□□□ 0.52
LINC00565-201ENST00000562710 ATP6V1FQ16864 119 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 OR10A7Q8NGE5 316 aa18.29■□□□□ 0.52
LINC00565-201ENST00000562710 DOCK11Q5JSL3 2073 aa18.28■□□□□ 0.52
LINC00565-201ENST00000562710 LRRC30A6NM36 301 aa18.28■□□□□ 0.52
LINC00565-201ENST00000562710 HMGB3O15347 200 aaKnown RBP18.28■□□□□ 0.52
LINC00565-201ENST00000562710 ZNF816Q0VGE8 651 aaPredicted RBP18.28■□□□□ 0.52
LINC00565-201ENST00000562710 MDS2Q8NDY4 140 aa18.28■□□□□ 0.52
LINC00565-201ENST00000562710 C5orf30Q96GV9 206 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms