RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CTDSP2O14595 271 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 TIMM23O14925 209 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 GAPDHP04406 335 aaKnown RBP10.75□□□□□ -0.69
CDH1-204ENST00000562118 CTXN2P0C2S0 81 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 CEACAM6P40199 344 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 ARHGDIBP52566 201 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 GVQW1Q8N7I0 195 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.75□□□□□ -0.69
CDH1-204ENST00000562118 C16orf95Q9H693 158 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 RANBP3Q9H6Z4 567 aaPredicted RBP10.75□□□□□ -0.69
CDH1-204ENST00000562118 RAB18Q9NP72 206 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 RDH8Q9NYR8 311 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 PIPOXQ9P0Z9 390 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 PITPNC1Q9UKF7 332 aa10.75□□□□□ -0.69
CDH1-204ENST00000562118 RNF212BA8MTL3 300 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 RAB29O14966 203 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 LPLP06858 475 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 CD1BP29016 333 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 BRS3P32247 399 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 RAB13P51153 203 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 ZNF660Q6AZW8 331 aaPredicted RBP10.74□□□□□ -0.69
CDH1-204ENST00000562118 BEST4Q8NFU0 473 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 OR10J5Q8NHC4 309 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 ABHD1Q96SE0 405 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 ABCB10Q9NRK6 738 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 RABL2AQ9UBK7 228 aaPredicted RBP10.74□□□□□ -0.69
CDH1-204ENST00000562118 RABL2BQ9UNT1 228 aa10.74□□□□□ -0.69
CDH1-204ENST00000562118 DPPA5A6NC42 116 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 CTDSPLO15194 276 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 ST8SIA5O15466 376 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 OR2F2O95006 317 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 AMY1AP04745 511 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 AMY2AP04746 511 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 PRSS3P35030 304 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 LSAMPQ13449 338 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 Q6ZSV7 163 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 TGIF2LXQ8IUE1 241 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 LYG1Q8N1E2 194 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 DRAM1Q8N682 238 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 OR56B4Q8NH76 319 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 SPATA3Q8NHX4 192 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 C15orf40Q8WUR7 153 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
CDH1-204ENST00000562118 DGCR14Q96DF8 476 aaKnown RBP10.73□□□□□ -0.69
CDH1-204ENST00000562118 C5orf30Q96GV9 206 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 RBM14Q96PK6 669 aaKnown RBP10.73□□□□□ -0.69
CDH1-204ENST00000562118 NABP2Q9BQ15 211 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 ST6GALNAC5Q9BVH7 336 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 EXTL2Q9UBQ6 330 aa10.73□□□□□ -0.69
CDH1-204ENST00000562118 BET1O15155 118 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 HSPA12AO43301 675 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 IGLV2-14P01704 120 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 SNRNP70P08621 437 aaKnown RBP10.72□□□□□ -0.69
CDH1-204ENST00000562118 FAM106CPP0CH98 169 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 OR3A3P47888 321 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 EIF4EBP1Q13541 118 aaPredicted RBP10.72□□□□□ -0.69
CDH1-204ENST00000562118 MSMO1Q15800 293 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 PLA1AQ53H76 456 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 OVCH2Q7RTZ1 564 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 LYSMD2Q8IV50 215 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 DTX3Q8N9I9 347 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 OR5AP2Q8NGF4 316 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 OR5AN1Q8NGI8 311 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 MRPL20Q9BYC9 149 aaKnown RBP10.72□□□□□ -0.69
CDH1-204ENST00000562118 MMP27Q9H306 513 aa10.72□□□□□ -0.69
CDH1-204ENST00000562118 A0A1B0GUS0 222 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 A6NHS1 94 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 CT45A6P0DMU7 189 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 CT45A5P0DMU8 189 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 CT45A7P0DMV0 189 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 REG1BP48304 166 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 RAG2P55895 527 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 MRPS10P82664 201 aaKnown RBP10.71□□□□□ -0.69
CDH1-204ENST00000562118 SSBP1Q04837 148 aaKnown RBP10.71□□□□□ -0.69
CDH1-204ENST00000562118 FOXL1Q12952 345 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 LY6EQ16553 131 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 DHRS7BQ6IAN0 325 aaPredicted RBP10.71□□□□□ -0.69
CDH1-204ENST00000562118 DHRS11Q6UWP2 260 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 TMEM219Q86XT9 240 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 MCFD2Q8NI22 146 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 ABHD14BQ96IU4 210 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 EAF1Q96JC9 268 aaPredicted RBP10.71□□□□□ -0.69
CDH1-204ENST00000562118 ZNF702PQ9H963 129 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 PLSCR3Q9NRY6 295 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 ZNF107Q9UII5 783 aaPredicted RBP10.71□□□□□ -0.69
CDH1-204ENST00000562118 RBMX2Q9Y388 322 aaKnown RBP10.71□□□□□ -0.69
CDH1-204ENST00000562118 OR2W1Q9Y3N9 320 aa10.71□□□□□ -0.69
CDH1-204ENST00000562118 OR5H14A6NHG9 310 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 FAM25AB3EWG3 89 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 FAM25CB3EWG5 89 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 FAM25GB3EWG6 89 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 ZNF736B4DX44 427 aaPredicted RBP10.7□□□□□ -0.7
CDH1-204ENST00000562118 H0YJW9 148 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 GABARAPH6UMI1 98 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 FGF16O43320 207 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 CD24P25063 80 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 RCVRNP35243 200 aa10.7□□□□□ -0.7
CDH1-204ENST00000562118 PROK1P58294 105 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms