RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ZNF728P0DKX0 622 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 IGHV1-8P0DP01 117 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 CEBPDP49716 269 aaPredicted RBP6.74□□□□□ -1.33
PALB2-202ENST00000561514 LGALS4P56470 323 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 AP3S2P59780 193 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 DLK1P80370 383 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 MEF2CQ06413 473 aaPredicted RBP6.74□□□□□ -1.33
PALB2-202ENST00000561514 DMRTC1Q5HYR2 192 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 SLC25A24Q6NUK1 477 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 MOB3CQ70IA8 216 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 TPRA1Q86W33 373 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 HSD17B11Q8NBQ5 300 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 OR11H4Q8NGC9 324 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 OR10A7Q8NGE5 316 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 OR13D1Q8NGV5 346 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 OR14K1Q8NGZ2 314 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 COQ8AQ8NI60 647 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 RXFP4Q8TDU9 374 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 PRSS22Q9GZN4 317 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 RIMS4Q9H426 269 aaPredicted RBP6.74□□□□□ -1.33
PALB2-202ENST00000561514 NDUFB11Q9NX14 153 aa6.74□□□□□ -1.33
PALB2-202ENST00000561514 GAR1Q9NY12 217 aaKnown RBP6.74□□□□□ -1.33
PALB2-202ENST00000561514 DYNC2H1Q8NCM8 4307 aaKnown RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 MEX3AA1L020 520 aaKnown RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 NAP1L6A6NFF2 107 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 SEC14L6B5MCN3 397 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 MCRIP1C9JLW8 97 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 TXNL1O43396 289 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 MGMTP16455 207 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 GABRB1P18505 474 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 GALP22466 123 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 CDX1P47902 265 aaPredicted RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 EFNB1P98172 346 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 COL10A1Q03692 680 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 MLLT11Q13015 90 aaPredicted RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 USF2Q15853 346 aaPredicted RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 NSUN5P1Q3KNT7 163 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 TCTEX1D4Q5JR98 221 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 FAM74A1Q5RGS3 127 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 IDNKQ5T6J7 187 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 ZNF57Q68EA5 555 aaPredicted RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 FAHD1Q6P587 224 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 Q6ZS46 218 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 C16orf82Q7Z2V1 217 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 PUSL1Q8N0Z8 303 aaKnown RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 LYG1Q8N1E2 194 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 BPIFCQ8NFQ6 507 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 TERB2Q8NHR7 220 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 KCTD7Q96MP8 289 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 CNN2Q99439 309 aaKnown RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 ZNF2Q9BSG1 426 aaPredicted RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 GPN1Q9HCN4 374 aaPredicted RBP6.73□□□□□ -1.33
PALB2-202ENST00000561514 FBXO7Q9Y3I1 522 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 LINC00312Q9Y6C7 94 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 R4GMQ9 66 aa6.73□□□□□ -1.33
PALB2-202ENST00000561514 COL7A1Q02388 2944 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 IGKV1-27A0A075B6S5 117 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 IGHV2-26A0A0B4J1V2 119 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 A0A0D9SG52 128 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 SNRPGP15A8MWD9 76 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 F8VVB4 439 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 F8VWA3 439 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 TGOLN2O43493 480 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 SSNA1O43805 119 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 ARG1P05089 322 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 CHRM2P08172 466 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 RPA2P15927 270 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 CD34P28906 385 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 VDAC2P45880 294 aaPredicted RBP6.72□□□□□ -1.33
PALB2-202ENST00000561514 BLCAPP62952 87 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 PITPNAQ00169 270 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 EGFEM1PQ0D2K5 195 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 BCL2L15Q5TBC7 163 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 ZNF322Q6U7Q0 402 aaPredicted RBP6.72□□□□□ -1.33
PALB2-202ENST00000561514 IL34Q6ZMJ4 242 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 TMEM219Q86XT9 240 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 SERPINA12Q8IW75 414 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 HS3ST5Q8IZT8 346 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 ZNF383Q8NA42 475 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 CCDC54Q8NEL0 328 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 OR4P4Q8NGL7 312 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 OR10K1Q8NGX5 313 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 SNX22Q96L94 193 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 ZNF714Q96N38 554 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 NKX3-1Q99801 234 aaPredicted RBP6.72□□□□□ -1.33
PALB2-202ENST00000561514 TEX12Q9BXU0 123 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 ADGRL4Q9HBW9 690 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 SEPSECSQ9HD40 501 aaKnown RBP6.72□□□□□ -1.33
PALB2-202ENST00000561514 GPR173Q9NS66 373 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 MTCH1Q9NZJ7 389 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 MRM2Q9UI43 246 aaKnown RBP6.72□□□□□ -1.33
PALB2-202ENST00000561514 OR52A1Q9UKL2 312 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 SLC22A13Q9Y226 551 aa6.72□□□□□ -1.33
PALB2-202ENST00000561514 hADV38S2A0JD32 116 aa6.71□□□□□ -1.34
PALB2-202ENST00000561514 COLCA2A8K830 154 aa6.71□□□□□ -1.34
PALB2-202ENST00000561514 K7EIL1 84 aa6.71□□□□□ -1.34
PALB2-202ENST00000561514 F2RL2O00254 374 aa6.71□□□□□ -1.34
PALB2-202ENST00000561514 OR2A4O95047 310 aa6.71□□□□□ -1.34
PALB2-202ENST00000561514 DUS4LO95620 317 aaKnown RBP6.71□□□□□ -1.34
PALB2-202ENST00000561514 IGLV1-47P01700 117 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms