RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	RPL12	P30050	165 aa	Known RBP	3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	GLP1R	P43220	463 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR3A4P	P47883	348 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	VEGFC	P49767	419 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	RORC	P51449	518 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	TDGF1P3	P51864	188 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	HNRNPA3	P51991	378 aa	Known RBP	3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	LIM2	P55344	173 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	RAB38	P57729	211 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	TCTA	P57738	103 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	RPL27	P61353	136 aa	Known RBP	3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	PAFAH1B2	P68402	229 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	IGLV3-21	P80748	117 aa	Predicted RBP	3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	RPL18A	Q02543	176 aa	Known RBP	3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	GINS1	Q14691	196 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	NSDHL	Q15738	373 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	HLA-DRB5	Q30154	266 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	SLC25A35	Q3KQZ1	300 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	MUC21	Q5SSG8	566 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	FAM27D1	Q5T7N8	215 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	FAM78B	Q5VT40	261 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	UBE2U	Q5VVX9	321 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	TOMM20L	Q6UXN7	152 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	RPS27L	Q71UM5	84 aa	Known RBP	3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	GALNT10	Q86SR1	603 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	SKA3	Q8IX90	412 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF440	Q8IYI8	595 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZADH2	Q8N4Q0	377 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	SMIM20	Q8N5G0	67 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	SPIC	Q8N5J4	248 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF485	Q8NCK3	441 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	APCDD1L	Q8NCL9	501 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR4M2	Q8NGB6	313 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR52E4	Q8NGH9	312 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	TNFAIP8L1	Q8WVP5	186 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	ASB17	Q8WXJ9	295 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	GHSR	Q92847	366 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	RAB3C	Q96E17	227 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	ARHGDIG	Q99819	225 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	PECR	Q9BY49	303 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF385D	Q9H6B1	395 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	ELL3	Q9HB65	397 aa	Predicted RBP	3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	LRTM1	Q9HBL6	345 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	SLC7A10	Q9NS82	523 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	DEPP	Q9NTK1	212 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	RASL12	Q9NYN1	266 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	OPTC	Q9UBM4	332 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	PCTP	Q9UKL6	214 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	ANGPT4	Q9Y264	503 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	RNF11	Q9Y3C5	154 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	UFC1	Q9Y3C8	167 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	USP9Y	O00507	2555 aa	Predicted RBP	3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	SHANK1	Q9Y566	2161 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	UNC79	Q9P2D8	2635 aa		3.21	□□□□□ -1.9
LRRC28-222	ENST00000561431	CCDC88C	Q9P219	2028 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	IGLV4-3	A0A075B6K6	122 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	DHRS7C	A6NNS2	312 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431		A8MT66	165 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	ANKRD65	E5RJM6	399 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431		F5H5K5	113 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	LOC110117498-PIK3R3	F6TDL0	507 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431		H3BMQ9	156 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	SAP18	O00422	153 aa	Known RBP	3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	FABP7	O15540	132 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR2J2	O76002	312 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	GCG	P01275	180 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	IGHV2-5	P01817	119 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	SHBG	P04278	402 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR5AL1	P0C617	328 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	ACSM4	P0C7M7	580 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	CT45A6	P0DMU7	189 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	CT45A5	P0DMU8	189 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	CT45A7	P0DMV0	189 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	OMG	P23515	440 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	PAX6	P26367	422 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	AKR1C3	P42330	323 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	DLX1	P56177	255 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	TCL1A	P56279	114 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	DNAJB13	P59910	316 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	ARG2	P78540	354 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	TGFBR3	Q03167	851 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	FMOD	Q06828	376 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	RAB35	Q15286	201 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	MPPED2	Q15777	294 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	C4orf26	Q17RF5	130 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	LRRC75B	Q2VPJ9	315 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	TRMT12	Q53H54	448 aa	Known RBP	3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	CT45A1	Q5HYN5	189 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	VAX1	Q5SQQ9	334 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	SPNS3	Q6ZMD2	512 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	TIFAB	Q6ZNK6	161 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	DGAT2L6	Q6ZPD8	337 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	IFT20	Q8IY31	132 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	CADM2	Q8N3J6	435 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	ST6GALNAC3	Q8NDV1	305 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	CT45A3	Q8NHU0	189 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF502	Q8TBZ5	544 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	IL1F10	Q8WWZ1	152 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	DNAJC9	Q8WXX5	260 aa		3.2	□□□□□ -1.9

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