RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 F2RP25116 425 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 PRRX1P54821 245 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 DLX6P56179 175 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 LMO4P61968 165 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 SUPT4H1P63272 117 aaKnown RBP8.47□□□□□ -1.05
USP3-219ENST00000561326 CD83Q01151 205 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 CATR1Q13166 79 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 ZNF66Q6ZN08 573 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 LGI3Q8N145 548 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 LRRC75A-AS1Q8N1F1 130 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 DRAM1Q8N682 238 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 C8orf31Q8N9H6 132 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 ASB13Q8WXK3 278 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 NRGNQ92686 78 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 S1PR3Q99500 378 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 HSD17B10Q99714 261 aaKnown RBP8.47□□□□□ -1.05
USP3-219ENST00000561326 AGMATQ9BSE5 352 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 ABHD14AQ9BUJ0 271 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 PARP12Q9H0J9 701 aaKnown RBP8.47□□□□□ -1.05
USP3-219ENST00000561326 LIN7CQ9NUP9 197 aaKnown RBP8.47□□□□□ -1.05
USP3-219ENST00000561326 PIPOXQ9P0Z9 390 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 ONECUT1Q9UBC0 465 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 SESN1Q9Y6P5 492 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 GCN1Q92616 2671 aaKnown RBP8.47□□□□□ -1.05
USP3-219ENST00000561326 MAP1AP78559 2803 aaPredicted RBP8.46□□□□□ -1.05
USP3-219ENST00000561326 VWC2LB2RUY7 222 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 H0Y980 276 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 M0R1W7 72 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 ST8SIA5O15466 376 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 OR5AC1P0C628 307 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 ZNF16P17020 682 aaPredicted RBP8.46□□□□□ -1.06
USP3-219ENST00000561326 ERVFRD-1P60508 538 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 RAP2BP61225 183 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 CYCSP99999 105 aaKnown RBP8.46□□□□□ -1.06
USP3-219ENST00000561326 TMEM187Q14656 261 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 CLEC12BQ2HXU8 276 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 SP6Q3SY56 376 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 CT45A1Q5HYN5 189 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 GSG1LQ6UXU4 331 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 SLC25A48Q6ZT89 311 aaKnown RBP8.46□□□□□ -1.06
USP3-219ENST00000561326 ZNF695Q8IW36 515 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 OR11H7Q8NGC8 314 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 OR9G1Q8NH87 305 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 CT45A3Q8NHU0 189 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 TNFRSF14Q92956 283 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 ABHD14BQ96IU4 210 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 ADTRPQ96IZ2 230 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 ZNF436Q9C0F3 470 aaPredicted RBP8.46□□□□□ -1.06
USP3-219ENST00000561326 TMEM222Q9H0R3 208 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 TMEM133Q9H2Q1 129 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 HEXA-AS1Q9H8Q6 139 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 RAB18Q9NP72 206 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 FAM212BQ9NTI7 297 aaPredicted RBP8.46□□□□□ -1.06
USP3-219ENST00000561326 PTPN13Q12923 2485 aa8.46□□□□□ -1.06
USP3-219ENST00000561326 A0A087X0M5 115 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 A0A1B0GX30 115 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 C5orf51A6NDU8 294 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 A8MXK9 166 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 J3QR06 171 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 GOSR2O14653 212 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 TNFSF12O43508 249 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 MMP23AO75900 390 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 ATG12O94817 140 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 OR2A4O95047 310 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 IGHV3-7P01780 117 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 RPA2P15927 270 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 CXCL3P19876 107 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 IL3RAP26951 378 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 GNG10P50151 68 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 ZNF134P52741 427 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 LCN2P80188 198 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 DEFB113Q30KQ7 82 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 ANKRD55Q3KP44 614 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 FAM53AQ6NSI3 398 aaPredicted RBP8.45□□□□□ -1.06
USP3-219ENST00000561326 LYG1Q8N1E2 194 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 ABHD12Q8N2K0 398 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 LINC00311Q8N616 119 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 KIR3DL3Q8N743 410 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 LRTM2Q8N967 370 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 ZNF439Q8NDP4 499 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 OR13D1Q8NGV5 346 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 OR10X1Q8NGY0 326 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 OR51H1Q8NH63 302 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 CD300LFQ8TDQ1 290 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 GLYATL2Q8WU03 294 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 LEAP2Q969E1 77 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 MBD6Q96DN6 1003 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 ST6GAL2Q96JF0 529 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 OR2A7Q96R45 310 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 PDCD10Q9BUL8 212 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 RANGRFQ9HD47 186 aaPredicted RBP8.45□□□□□ -1.06
USP3-219ENST00000561326 SDHAF2Q9NX18 166 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 PRELID3BQ9Y3B1 194 aa8.45□□□□□ -1.06
USP3-219ENST00000561326 APCP25054 2843 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 ABCA12Q86UK0 2595 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 DUXBA0A1W2PPF3 345 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 DBX1A6NMT0 343 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 A8MV72 311 aaPredicted RBP8.44□□□□□ -1.06
USP3-219ENST00000561326 FAM25EA8MYX2 175 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms