RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 IGSF11Q5DX21 431 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 RNASE12Q5GAN4 147 aaKnown RBP8.67□□□□□ -1.02
TPM1-229ENST00000561242 RNASE10Q5GAN6 216 aaKnown RBP8.67□□□□□ -1.02
TPM1-229ENST00000561242 CT45A1Q5HYN5 189 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 HCP5Q6MZN7 132 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 FAM71F2Q6NXP2 309 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 Q6ZS49 121 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 THNSL2Q86YJ6 484 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 DRAM1Q8N682 238 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 OR8H1Q8NGG4 311 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 OR56B4Q8NH76 319 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 CT45A3Q8NHU0 189 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 CHIAQ9BZP6 476 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 C11orf54Q9H0W9 315 aaPredicted RBP8.67□□□□□ -1.02
TPM1-229ENST00000561242 OR2D2Q9H210 308 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 PRDM13Q9H4Q3 707 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 OR1A1Q9P1Q5 309 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 TCF19Q9Y242 345 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 KCNK7Q9Y2U2 307 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 A3GALT2U3KPV4 340 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 ITPR3Q14573 2671 aa8.67□□□□□ -1.02
TPM1-229ENST00000561242 TRBV6-7A0A0A0MS04 114 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 IGHV1-3A0A0C4DH29 117 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 CENPXA8MT69 81 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 GABARAPH6UMI1 98 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 IGKV1D-33P01593 117 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 IGKV1-33P01594 117 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 PMP2P02689 132 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 SNRNP70P08621 437 aaKnown RBP8.66□□□□□ -1.02
TPM1-229ENST00000561242 PGAM2P15259 253 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 TBPP20226 339 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 HLA-DMAP28067 261 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 RAG2P55895 527 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 TAS2R19P59542 299 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 FXYD4P59646 89 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 RPS16P62249 146 aaKnown RBP8.66□□□□□ -1.02
TPM1-229ENST00000561242 SSBP1Q04837 148 aaKnown RBP8.66□□□□□ -1.02
TPM1-229ENST00000561242 CATR1Q13166 79 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 GNMTQ14749 295 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 ABCA11PQ4W5N1 156 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 ZDHHC22Q8N966 263 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 SECTM1Q8WVN6 248 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 RTN4IP1Q8WWV3 396 aaPredicted RBP8.66□□□□□ -1.02
TPM1-229ENST00000561242 ZNF48Q96MX3 618 aaPredicted RBP8.66□□□□□ -1.02
TPM1-229ENST00000561242 SCGB3A2Q96PL1 93 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 SLC25A33Q9BSK2 321 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 C19orf24Q9BVV8 132 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 SLC5A7Q9GZV3 580 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 OR2W1Q9Y3N9 320 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 SOX21Q9Y651 276 aaPredicted RBP8.66□□□□□ -1.02
TPM1-229ENST00000561242 F8P00451 2351 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 ABCA1O95477 2261 aa8.66□□□□□ -1.02
TPM1-229ENST00000561242 DPPA5A6NC42 116 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 OR5H14A6NHG9 310 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 NFYAP23511 347 aaPredicted RBP8.65□□□□□ -1.02
TPM1-229ENST00000561242 CD40LGP29965 261 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 ECI1P42126 302 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 THBS3P49746 956 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 MEF2DQ14814 521 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 TRIQKQ629K1 86 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 PRIMA1Q86XR5 153 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 FOXRED2Q8IWF2 684 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 LAX1Q8IWV1 398 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 GVQW1Q8N7I0 195 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 ZBTB34Q8NCN2 500 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 ABHD5Q8WTS1 349 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 FLYWCH2Q96CP2 140 aaKnown RBP8.65□□□□□ -1.02
TPM1-229ENST00000561242 ABHD14BQ96IU4 210 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 TSNAXQ99598 290 aaKnown RBP8.65□□□□□ -1.02
TPM1-229ENST00000561242 ZNF2Q9BSG1 426 aaPredicted RBP8.65□□□□□ -1.02
TPM1-229ENST00000561242 CABLES2Q9BTV7 478 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 GON7Q9BXV9 100 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 MOB4Q9Y3A3 225 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 WASHC3Q9Y3C0 194 aa8.65□□□□□ -1.02
TPM1-229ENST00000561242 MED13LQ71F56 2210 aa8.65□□□□□ -1.03
TPM1-229ENST00000561242 CR1P17927 2039 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 SAA2-SAA4A0A096LPE2 208 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 IGHV3-72A0A0B4J1Y9 119 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 CREBL2O60519 120 aaPredicted RBP8.64□□□□□ -1.03
TPM1-229ENST00000561242 ACTL6BO94805 426 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 OR2F2O95006 317 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 RAB3DO95716 219 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 SAA2P0DJI9 122 aaPredicted RBP8.64□□□□□ -1.03
TPM1-229ENST00000561242 CD24P25063 80 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 PTBP1P26599 531 aaKnown RBP eCLIP8.64□□□□□ -1.037e-7■■■□□ 17
TPM1-229ENST00000561242 TNFSF8P32971 234 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 KIR2DS2P43631 304 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 SLC35B1P78383 322 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 MMDQ15546 238 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 SCGB2B2Q4G0G5 96 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 ZNF57Q68EA5 555 aaPredicted RBP8.64□□□□□ -1.03
TPM1-229ENST00000561242 CENPVQ7Z7K6 275 aaPredicted RBP8.64□□□□□ -1.03
TPM1-229ENST00000561242 TMEM219Q86XT9 240 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 ZNF645Q8N7E2 425 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 ZFAND1Q8TCF1 268 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 C17orf50Q8WW18 174 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 TCTEX1D2Q8WW35 142 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 GIMAP1Q8WWP7 306 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 AJUBAQ96IF1 538 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 RBM14Q96PK6 669 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms