RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 GABRA2P47869 451 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 PMS2P11Q13670 270 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 GUCA2BQ16661 112 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 AARDQ4LEZ3 155 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 AKR1C8PQ5T2L2 129 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 SP5Q6BEB4 398 aaPredicted RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 ZNF474Q6S9Z5 364 aaPredicted RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 TMEM182Q6ZP80 229 aaPredicted RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 ZNF826PQ6ZT77 177 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 FGFRL1Q8N441 504 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 GCSAMQ8N6F7 178 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 BOLLQ8N9W6 283 aaKnown RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 OR1L1Q8NH94 360 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 Q8TCH9 128 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 FAM222BQ8WU58 562 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 TMEM171Q8WVE6 324 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 PINX1Q96BK5 328 aaKnown RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 S100PBPQ96BU1 408 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 MEGF10Q96KG7 1140 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 YPEL2Q96QA6 119 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 KRTAP4-6Q9BYQ5 205 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 MRPL37Q9BZE1 423 aaKnown RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 MAGT1Q9H0U3 335 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 OR2D2Q9H210 308 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 TUBA4BQ9H853 241 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 PSENENQ9NZ42 101 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 OR6C3Q9NZP0 311 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 HEATR1Q9H583 2144 aaKnown RBP8.12□□□□□ -1.11
RTF1-206ENST00000560447 FAM186AA6NE01 2351 aa8.12□□□□□ -1.11
RTF1-206ENST00000560447 ODAMA1E959 279 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 A8MXE2 369 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 C15orf65H3BRN8 121 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 H7C2Y5 167 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 PRRG2O14669 202 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 WNT9BO14905 357 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 KLK10O43240 276 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 WISP2O76076 250 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 LHBP01229 141 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 EPHA1P21709 976 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 RAB7AP51149 207 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 AKR1C1Q04828 323 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 AESQ08117 197 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 CLINT1Q14677 625 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 RHEBQ15382 184 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 TMEM14EPQ6UXP3 125 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 PRR18Q8N4B5 295 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 ZNF561Q8N587 486 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 CD177Q8N6Q3 437 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 OR2Z1Q8NG97 314 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 OR10G4Q8NGN3 311 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 FAM213BQ8TBF2 198 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 SCGB1C1Q8TD33 95 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 FAM234AQ9H0X4 552 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 SLC35B3Q9H1N7 401 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 SH3BGRL3Q9H299 93 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 MSL2Q9HCI7 577 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 SMCO4Q9NRQ5 59 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 COQ3Q9NZJ6 369 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 IL19Q9UHD0 177 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 FAM96BQ9Y3D0 163 aa8.11□□□□□ -1.11
RTF1-206ENST00000560447 FAM74A7A6NL05 159 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 LRRC30A6NM36 301 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 M0R1B8 84 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 CST7O76096 145 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 CLDN1O95832 211 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 HSPB1P04792 205 aaKnown RBP8.1□□□□□ -1.11
RTF1-206ENST00000560447 PTAFRP25105 342 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 TAGLN2P37802 199 aaKnown RBP8.1□□□□□ -1.11
RTF1-206ENST00000560447 ZNF83P51522 516 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 UBE2KP61086 200 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 TNFRSF9Q07011 255 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 LRRC75BQ2VPJ9 315 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 FAM74A3Q4VXF1 159 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 SLC25A24Q6NUK1 477 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 CLEC9AQ6UXN8 241 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 Q6ZRM9 215 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 CENPVQ7Z7K6 275 aaPredicted RBP8.1□□□□□ -1.11
RTF1-206ENST00000560447 ZNF525Q8N782 197 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 C15orf54Q8N8G6 183 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 OR52L2PQ8NGH6 319 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 OR13A1Q8NGR1 328 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 MBD3L1Q8WWY6 194 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 C14orf79Q96F83 325 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 SDSLQ96GA7 329 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 EIF5A2Q9GZV4 153 aaKnown RBP8.1□□□□□ -1.11
RTF1-206ENST00000560447 TMEM231Q9H6L2 316 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 KCNJ16Q9NPI9 418 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 UFSP2Q9NUQ7 469 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 RNF7Q9UBF6 113 aa8.1□□□□□ -1.11
RTF1-206ENST00000560447 IGKV1D-17A0A075B6S4 117 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 TRAV39A0A0B4J263 110 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 MBP02144 154 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 CD55P08174 381 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 CGB3P0DN86 165 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 CGB7P0DN87 165 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 FOLR2P14207 255 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 ZNF16P17020 682 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms