RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 NPBQ8NG41 125 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 OR4A4PQ8NGN8 299 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 FAM110DQ8TAY7 271 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-213ENST00000560175 SETD6Q8TBK2 473 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 CHPT1Q8WUD6 406 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 EDARADDQ8WWZ3 215 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 CABLES2Q9BTV7 478 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 MRPL20Q9BYC9 149 aaKnown RBP10.43□□□□□ -0.74
SMAD3-213ENST00000560175 OR1A1Q9P1Q5 309 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 GAB2Q9UQC2 676 aa10.43□□□□□ -0.74
SMAD3-213ENST00000560175 A0A087WXM4 84 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 ST8SIA5O15466 376 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 TNFAIP8O95379 198 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 FCGR3AP08637 254 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 CD3GP09693 182 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 CT45A6P0DMU7 189 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 CT45A5P0DMU8 189 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 CT45A7P0DMV0 189 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 GNB3P16520 340 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 SERPINB10P48595 397 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 NEDD8Q15843 81 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 C9orf152Q5JTZ5 239 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 SLC35E3Q7Z769 313 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 OR5AN1Q8NGI8 311 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 YIPF6Q96EC8 236 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 RITA1Q96K30 269 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 CHCHD6Q9BRQ6 235 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 CENPOQ9BU64 300 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 RNF167Q9H6Y7 350 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 TSSC4Q9Y5U2 329 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-213ENST00000560175 DNAH3Q8TD57 4116 aa10.42□□□□□ -0.74
SMAD3-213ENST00000560175 PRKDCP78527 4128 aaKnown RBP10.41□□□□□ -0.74
SMAD3-213ENST00000560175 TRBV6-7A0A0A0MS04 114 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 SMIM30A4D0T7 59 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 PSMB11A5LHX3 300 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 NCBP2LA6PVI3 153 aaKnown RBP10.41□□□□□ -0.74
SMAD3-213ENST00000560175 FABP7O15540 132 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 KCNAB3O43448 404 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 NDUFA3O95167 84 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 IGF1P05019 195 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 CLEC2LP0C7M8 214 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 DTYMKP23919 212 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 GPR12P47775 334 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 KIR2DS1Q14954 304 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 STPG2Q8N412 459 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 COMMD1Q8N668 190 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 RNF152Q8N8N0 203 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 TSPAN14Q8NG11 270 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 OR4F17Q8NGA8 305 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 OR4X2Q8NGF9 303 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 PHF21AQ96BD5 680 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 RBMXL1Q96E39 390 aaKnown RBP10.41□□□□□ -0.74
SMAD3-213ENST00000560175 ABHD14BQ96IU4 210 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 NOL4LQ96MY1 436 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-213ENST00000560175 OR4F4Q96R69 305 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 RNF5Q99942 180 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 ATG5Q9H1Y0 275 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 DAPK2Q9UIK4 370 aa10.41□□□□□ -0.74
SMAD3-213ENST00000560175 ELF5Q9UKW6 265 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-213ENST00000560175 OR5H14A6NHG9 310 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 AP4M1O00189 453 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 SCGNO76038 276 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 GSTP1P09211 210 aaKnown RBP10.4□□□□□ -0.74
SMAD3-213ENST00000560175 GSTT2P0CG29 244 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 GSTT2BP0CG30 244 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 MC5RP33032 325 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 ACTBP60709 375 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 CFHR3Q02985 330 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 ZNF260Q3ZCT1 412 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 CDNFQ49AH0 187 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 RPL39P5Q59GN2 51 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 IGSF11Q5DX21 431 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 KPRPQ5T749 579 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-213ENST00000560175 HACD4Q5VWC8 232 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 FOXRED2Q8IWF2 684 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-213ENST00000560175 RASL11BQ9BPW5 248 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 DCSTAMPQ9H295 470 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 ZFP57Q9NU63 452 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 RDH8Q9NYR8 311 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 ETV7Q9Y603 341 aa10.4□□□□□ -0.74
SMAD3-213ENST00000560175 IGKV1D-8A0A087WSZ0 117 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 A0A0A6YYH2 397 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 TCRBV4S1A1TA0A5B7 111 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 A6NJ64 397 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 H0YJW9 148 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 HSPA12AO43301 675 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 WIPF1O43516 503 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 HLA-DRB1P01911 266 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 SNRPBP14678 240 aaKnown RBP10.39□□□□□ -0.75
SMAD3-213ENST00000560175 SOX6P35712 828 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 PITPNAQ00169 270 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 TIMM50Q3ZCQ8 353 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 ZNF329Q86UD4 541 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 LGALS14Q8TCE9 139 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 R3HDM4Q96D70 268 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 HSPB9Q9BQS6 159 aa10.39□□□□□ -0.75
SMAD3-213ENST00000560175 ZNF230Q9UIE0 474 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms