RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 MMP28Q9H239 520 aa7.82□□□□□ -1.16
CUX1-216ENST00000558469 SCP2D1Q9UJQ7 156 aa7.82□□□□□ -1.16
CUX1-216ENST00000558469 TBC1D24Q9ULP9 559 aa7.82□□□□□ -1.16
CUX1-216ENST00000558469 IGKV1D-13A0A0B4J2D9 117 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 IGHV1-69DA0A0B4J2H0 117 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 NAP1L6A6NFF2 107 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 OR5H14A6NHG9 310 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 ODF3BA8MYP8 253 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 BUB1B-PAK6H3BSN5 160 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 ITGB1BP1O14713 200 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 NPFFO15130 113 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 LYRM1O43325 122 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 IGLV1-47P01700 117 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 IGHV1-69P01742 117 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 IGKV1-13P0DP09 117 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 RAB7AP51149 207 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 HLA-DRB5Q30154 266 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 KLF17Q5JT82 389 aaPredicted RBP7.81□□□□□ -1.16
CUX1-216ENST00000558469 LCE2AQ5TA79 106 aaPredicted RBP7.81□□□□□ -1.16
CUX1-216ENST00000558469 AADACL3Q5VUY0 350 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 RUSC1-AS1Q66K80 236 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 ZNF626Q68DY1 528 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 BRD3OSQ6XYD6 125 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 IDO2Q6ZQW0 420 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 IL17RELQ6ZVW7 336 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 Q71RC1 249 aaPredicted RBP7.81□□□□□ -1.16
CUX1-216ENST00000558469 LDLRAD3Q86YD5 345 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 LYG1Q8N1E2 194 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 LINC00311Q8N616 119 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 OR4P4Q8NGL7 312 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 TERB2Q8NHR7 220 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 NANPQ8TBE9 248 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 TOMM40LQ969M1 308 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 ABHD14BQ96IU4 210 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 PRRT1Q99946 306 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 C7orf50Q9BRJ6 194 aaKnown RBP7.81□□□□□ -1.16
CUX1-216ENST00000558469 AGMATQ9BSE5 352 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 OR2D2Q9H210 308 aa7.81□□□□□ -1.16
CUX1-216ENST00000558469 GSX1Q9H4S2 264 aaPredicted RBP7.81□□□□□ -1.16
CUX1-216ENST00000558469 EPHA1P21709 976 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 HTR1DP28221 377 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 SAA4P35542 130 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 GPR12P47775 334 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 CCR6P51684 374 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 DEFA1P59665 94 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 DEFA3P59666 94 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 BAMBIQ13145 260 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 ASAH1Q13510 395 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 DCTN2Q13561 401 aaKnown RBP7.8□□□□□ -1.16
CUX1-216ENST00000558469 MZT2BQ6NZ67 158 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 LHFPL4Q7Z7J7 247 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 LHFPL1Q86WI0 220 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 ODF3L1Q8IXM7 274 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 MARCH1Q8TCQ1 289 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 CREB3L1Q96BA8 519 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 MOB3AQ96BX8 217 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 SLC5A7Q9GZV3 580 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 FXYD6Q9H0Q3 95 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 IFI27L2Q9H2X8 130 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 CCL28Q9NRJ3 127 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 SLC2A8Q9NY64 477 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 ZNF221Q9UK13 617 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 NUP50Q9UKX7 468 aa7.8□□□□□ -1.16
CUX1-216ENST00000558469 AMMECR1Q9Y4X0 333 aaPredicted RBP7.8□□□□□ -1.16
CUX1-216ENST00000558469 MXRA5Q9NR99 2828 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 SAA2-SAA4A0A096LPE2 208 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 LEUTXA8MZ59 168 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 LY6LH3BQJ8 138 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 HSD17B6O14756 317 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 RAB29O14966 203 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 FSHBP01225 129 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 SAA2P0DJI9 122 aaPredicted RBP7.79□□□□□ -1.16
CUX1-216ENST00000558469 PGAM2P15259 253 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 HNF1AP20823 631 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 IL3RAP26951 378 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 BTCP35070 178 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 CEACAM3P40198 252 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 DIAPH2-AS1Q14236 149 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 MIDNQ504T8 468 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 RPL39P5Q59GN2 51 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 LDLRAD2Q5SZI1 272 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 ZNF818PQ6ZRF7 136 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 TEX29Q8N6K0 151 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 ZNF645Q8N7E2 425 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 POC5Q8NA72 575 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 FAM216AQ8WUB2 273 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 C17orf50Q8WW18 174 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 MRGPRFQ96AM1 343 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 S1PR3Q99500 378 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 MS4A7Q9GZW8 240 aaPredicted RBP7.79□□□□□ -1.16
CUX1-216ENST00000558469 GHITMQ9H3K2 345 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 PALMDQ9NP74 551 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 TMEM160Q9NX00 188 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 SDHAF2Q9NX18 166 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 PIPOXQ9P0Z9 390 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 DPM3Q9P2X0 92 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 TBL2Q9Y4P3 447 aaKnown RBP7.79□□□□□ -1.16
CUX1-216ENST00000558469 HILPDAQ9Y5L2 63 aa7.79□□□□□ -1.16
CUX1-216ENST00000558469 ZFHX3Q15911 3703 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 SONP18583 2426 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms