RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 DIABLOQ9NR28 239 aa6.76□□□□□ -1.33
TPM1-213ENST00000558400 A0A075B6Q4 140 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 FABP7O15540 132 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 FBXO24O75426 580 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 AMY1AP04745 511 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 AMY2AP04746 511 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 FCGR3AP08637 254 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 SCTP09683 121 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 PLA2G7Q13093 441 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 GNMTQ14749 295 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 MOGAT2Q3SYC2 334 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 LINC01559Q495D7 138 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 C9orf152Q5JTZ5 239 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 HACD4Q5VWC8 232 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 FAM53AQ6NSI3 398 aaPredicted RBP6.75□□□□□ -1.33
TPM1-213ENST00000558400 ZNF833PQ6ZTB9 187 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 OR5AU1Q8NGC0 362 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 OR10J5Q8NHC4 309 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 CHPT1Q8WUD6 406 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 S100A16Q96FQ6 103 aaKnown RBP6.75□□□□□ -1.33
TPM1-213ENST00000558400 RNF5Q99942 180 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 RASL11BQ9BPW5 248 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 AGMATQ9BSE5 352 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 HDHD3Q9BSH5 251 aaPredicted RBP6.75□□□□□ -1.33
TPM1-213ENST00000558400 TOLLIPQ9H0E2 274 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 C11orf54Q9H0W9 315 aaPredicted RBP6.75□□□□□ -1.33
TPM1-213ENST00000558400 MMP27Q9H306 513 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 LIN7CQ9NUP9 197 aaKnown RBP6.75□□□□□ -1.33
TPM1-213ENST00000558400 RHBDL2Q9NX52 303 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 ZNF221Q9UK13 617 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 SPATA2Q9UM82 520 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 GAB2Q9UQC2 676 aa6.75□□□□□ -1.33
TPM1-213ENST00000558400 TRBV6-7A0A0A0MS04 114 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 IGHV3-72A0A0B4J1Y9 119 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 A0A0B4J203 849 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 SMIM30A4D0T7 59 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 OR5H14A6NHG9 310 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 RBBP9O75884 186 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 IGHG2P01859 326 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 OPN1MWP04001 364 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 CSF1P09603 554 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 CLEC2LP0C7M8 214 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 OPN1MW2P0DN77 364 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 OPN1MW3P0DN78 364 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 RPS19P39019 145 aaKnown RBP6.74□□□□□ -1.33
TPM1-213ENST00000558400 GNG2P59768 71 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 TAGLNQ01995 201 aaKnown RBP6.74□□□□□ -1.33
TPM1-213ENST00000558400 LSAMPQ13449 338 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 Q6ZS46 218 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 NDUFA11Q86Y39 141 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 FOXRED2Q8IWF2 684 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 ODF3L1Q8IXM7 274 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 COMMD1Q8N668 190 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 Q8N6K4 173 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 C5orf56Q8N8D9 126 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.74□□□□□ -1.33
TPM1-213ENST00000558400 LGALS14Q8TCE9 139 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 WIPF2Q8TF74 440 aaPredicted RBP6.74□□□□□ -1.33
TPM1-213ENST00000558400 NABP2Q9BQ15 211 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 ZNF251Q9BRH9 671 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 ST6GALNAC5Q9BVH7 336 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 ABCG5Q9H222 651 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 RNF167Q9H6Y7 350 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 RDH8Q9NYR8 311 aa6.74□□□□□ -1.33
TPM1-213ENST00000558400 SAA2-SAA4A0A096LPE2 208 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 AP4M1O00189 453 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 BET1O15155 118 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 SLC22A5O76082 557 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 GSTT2P0CG29 244 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 GSTT2BP0CG30 244 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 SAA2P0DJI9 122 aaPredicted RBP6.73□□□□□ -1.33
TPM1-213ENST00000558400 SOX6P35712 828 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 GPR12P47775 334 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 OR3A3P47888 321 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 SLC35B1P78383 322 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 CD83Q01151 205 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 ZNF260Q3ZCT1 412 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 CNIH2Q6PI25 160 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 Q6ZPA2 131 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 C5orf24Q7Z6I8 188 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 SLC35E3Q7Z769 313 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 Q8N9W7 124 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 OR4X2Q8NGF9 303 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 OR5AN1Q8NGI8 311 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 OR13F1Q8NGS4 319 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 CMTM3Q96MX0 182 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 GINS4Q9BRT9 223 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 CABLES2Q9BTV7 478 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 FUNDC2Q9BWH2 189 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 IFI27L2Q9H2X8 130 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 PLSCR3Q9NRY6 295 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 OR1A1Q9P1Q5 309 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 KIAA1456Q9P272 454 aa6.73□□□□□ -1.33
TPM1-213ENST00000558400 ZNF230Q9UIE0 474 aaPredicted RBP6.73□□□□□ -1.33
TPM1-213ENST00000558400 RBM7Q9Y580 266 aaKnown RBP6.73□□□□□ -1.33
TPM1-213ENST00000558400 WNK1Q9H4A3 2382 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 TRAV18A0A075B6X5 111 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 IGKV1-6A0A0C4DH72 117 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 SMIM31A0A1B0GVY4 71 aa6.72□□□□□ -1.33
TPM1-213ENST00000558400 TCRBV4S1A1TA0A5B7 111 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms