RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 OR8U8P0C7N1 319 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 SRMP19623 302 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 RAB9AP51151 201 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 UNC119Q13432 240 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 SPHARQ15513 63 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 C6orf141Q5SZD1 244 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 LIPKQ5VXJ0 399 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 SVOPQ8N4V2 548 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 UFD1Q92890 307 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 SCN3BQ9NY72 215 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 AK3Q9UIJ7 227 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 SCOCQ9UIL1 159 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 ZNF256Q9Y2P7 627 aaPredicted RBP12.09□□□□□ -0.47
TPM1-211ENST00000558314 U3KQK5 164 aa12.09□□□□□ -0.47
TPM1-211ENST00000558314 RAB29O14966 203 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 SOCS1O15524 211 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 SAP30O75446 220 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 IGHV3-11P01762 117 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 PPIFP30405 207 aaKnown RBP12.08□□□□□ -0.48
TPM1-211ENST00000558314 CEACAM6P40199 344 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 NDPQ00604 133 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 FHL3Q13643 280 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 C1orf100Q5SVJ3 147 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 DRAXINQ8NBI3 349 aaPredicted RBP12.08□□□□□ -0.48
TPM1-211ENST00000558314 FBLIM1Q8WUP2 373 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 PHYHIPQ92561 330 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 DCUN1D4Q92564 292 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 MS4A10Q96PG2 267 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 CHCHD6Q9BRQ6 235 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 FAM103A1Q9BTL3 118 aaKnown RBP12.08□□□□□ -0.48
TPM1-211ENST00000558314 ISYNA1Q9NPH2 558 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 FKBP14Q9NWM8 211 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 PIPOXQ9P0Z9 390 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 OR1A1Q9P1Q5 309 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 AK6Q9Y3D8 172 aaKnown RBP12.08□□□□□ -0.48
TPM1-211ENST00000558314 FBXO7Q9Y3I1 522 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 NBEAL2Q6ZNJ1 2754 aa12.08□□□□□ -0.48
TPM1-211ENST00000558314 A0A0A6YYD4 124 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 I3L521 148 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 FCN1O00602 326 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 BPNT1O95861 308 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 NHLRC4P0CG21 123 aaPredicted RBP12.07□□□□□ -0.48
TPM1-211ENST00000558314 CT45A6P0DMU7 189 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 CT45A5P0DMU8 189 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 CT45A7P0DMV0 189 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 SLURP1P55000 103 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 CX3CL1P78423 397 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 ASPHD1Q5U4P2 390 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 NPBQ8NG41 125 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 OR6M1Q8NGM8 313 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 URM1Q9BTM9 101 aaKnown RBP12.07□□□□□ -0.48
TPM1-211ENST00000558314 TM2D1Q9BX74 207 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 CCDC90BQ9GZT6 254 aa12.07□□□□□ -0.48
TPM1-211ENST00000558314 LSM4Q9Y4Z0 139 aaKnown RBP12.07□□□□□ -0.48
TPM1-211ENST00000558314 COL7A1Q02388 2944 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 TMEM14DPA8MWL7 114 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 RRHO14718 337 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 OVOL1O14753 267 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 SLC22A1O15245 554 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 IGLV1-40P01703 118 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 ARSBP15848 533 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 CPEP16870 476 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 VEGFCP49767 419 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 CLDN12P56749 244 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 RPS25P62851 125 aaKnown RBP12.06□□□□□ -0.48
TPM1-211ENST00000558314 HLA-DRB3P79483 266 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 KIAA0141Q14154 515 aaPredicted RBP12.06□□□□□ -0.48
TPM1-211ENST00000558314 RAB11BQ15907 218 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 UNQ5815/PRO19632Q6UWF5 114 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 MYOZ3Q8TDC0 251 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 C11orf54Q9H0W9 315 aaPredicted RBP12.06□□□□□ -0.48
TPM1-211ENST00000558314 LPAR5Q9H1C0 372 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 METTL1Q9UBP6 276 aaKnown RBP12.06□□□□□ -0.48
TPM1-211ENST00000558314 ZNF580Q9UK33 172 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 GAB2Q9UQC2 676 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 FOXA2Q9Y261 457 aaPredicted RBP12.06□□□□□ -0.48
TPM1-211ENST00000558314 WASHC3Q9Y3C0 194 aa12.06□□□□□ -0.48
TPM1-211ENST00000558314 LINC01619G3V211 115 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 H0YJW9 148 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 CASQ2O14958 399 aaPredicted RBP12.05□□□□□ -0.48
TPM1-211ENST00000558314 NDUFA3O95167 84 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 NAPSAO96009 420 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 SCTP09683 121 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 UCHL1P09936 223 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 SNRPBP14678 240 aaKnown RBP12.05□□□□□ -0.48
TPM1-211ENST00000558314 RPS16P62249 146 aaKnown RBP12.05□□□□□ -0.48
TPM1-211ENST00000558314 LY6G6FQ5SQ64 297 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 ZNF660Q6AZW8 331 aaPredicted RBP12.05□□□□□ -0.48
TPM1-211ENST00000558314 PPP1R27Q86WC6 154 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 MINDY2Q8NBR6 621 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 DLX4Q92988 240 aaPredicted RBP12.05□□□□□ -0.48
TPM1-211ENST00000558314 CMSS1Q9BQ75 279 aaKnown RBP12.05□□□□□ -0.48
TPM1-211ENST00000558314 ZNF355PQ9NSJ1 428 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 ZNF221Q9UK13 617 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 LSM2Q9Y333 95 aaKnown RBP12.05□□□□□ -0.48
TPM1-211ENST00000558314 DNAH9Q9NYC9 4486 aa12.05□□□□□ -0.48
TPM1-211ENST00000558314 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
TPM1-211ENST00000558314 A0A087WW49 117 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms