RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ANXA10Q9UJ72 324 aa1.85□□□□□ -2.11
SPG11-206ENST00000558093 HSPB8Q9UJY1 196 aa1.85□□□□□ -2.11
SPG11-206ENST00000558093 RAB22AQ9UL26 194 aa1.85□□□□□ -2.11
SPG11-206ENST00000558093 ST3GAL6Q9Y274 331 aa1.85□□□□□ -2.11
SPG11-206ENST00000558093 POLR1DQ9Y2S0 133 aa1.85□□□□□ -2.11
SPG11-206ENST00000558093 YTHDF2Q9Y5A9 579 aaKnown RBP1.85□□□□□ -2.11
SPG11-206ENST00000558093 RAPGEF2Q9Y4G8 1499 aa1.85□□□□□ -2.11
SPG11-206ENST00000558093 CDK5RAP2Q96SN8 1893 aa1.85□□□□□ -2.11
SPG11-206ENST00000558093 CABIN1Q9Y6J0 2220 aa1.85□□□□□ -2.11
SPG11-206ENST00000558093 CCDC180Q9P1Z9 1646 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OVOS2A0A0J9YW53 1432 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 NCOA1Q15788 1441 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OVOS2Q6IE36 1432 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 FGD6Q6ZV73 1430 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 SMG6Q86US8 1419 aaKnown RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 LOXHD1Q8IVV2 1947 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 ARAP1Q96P48 1450 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 A0A087WX48 190 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 MEIKINA0A087WXM9 373 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 FAM236DA0A1B0GTK5 79 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 ARL5CA6NH57 179 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 EEF1E1-BLOC1S5C9J1V9 151 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 C12orf77C9JDV5 145 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 FAAHO00519 579 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 TP53I11O14683 189 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 DEGS1O15121 323 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 EEF1E1O43324 174 aaKnown RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 CD5LO43866 347 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 TPST1O60507 370 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 BANF1O75531 89 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 CDS2O95674 445 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 FAM107AO95990 144 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 EIF4EP06730 217 aaKnown RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 IL3P08700 152 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 FAM236CP0DP71 79 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 CD79AP11912 226 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 NPY1RP25929 384 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 PPICP45877 212 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 RAB5BP61020 215 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 HSPE1P61604 102 aaKnown RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 CACNG7P62955 275 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 GNG5P63218 68 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 ZNF92Q03936 586 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 REG3AQ06141 175 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 PRDX1Q06830 199 aaKnown RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 BAXQ07812 192 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 BIKQ13323 160 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OR8B8Q15620 311 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 LTC4SQ16873 150 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 ATP6AP1LQ52LC2 224 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 COA6Q5JTJ3 125 aaKnown RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 FAM162BQ5T6X4 162 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 SPATA31B1PQ5VZV4 182 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 LAMTOR1Q6IAA8 161 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 SLC25A34Q6PIV7 304 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 TOMM20LQ6UXN7 152 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 FAM183BPQ6ZVS7 135 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 STRADAQ7RTN6 431 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 IFT20Q8IY31 132 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 ZNF709Q8N972 641 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 UBAC2Q8NBM4 344 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OR52L1Q8NGH7 329 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OR52E2Q8NGJ4 325 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OR2A1Q8NGT9 310 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OR10R2Q8NGX6 335 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OR51Q1Q8NH59 317 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OR1S1Q8NH92 325 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 NT5CQ8TCD5 201 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 BLNKQ8WV28 456 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 RXFP2Q8WXD0 754 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 TMEM54Q969K7 222 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 PTX4Q96A99 478 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 APOBEC3DQ96AK3 386 aaPredicted RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 REEP6Q96HR9 211 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 CAPZA3Q96KX2 299 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 PPP3R2Q96LZ3 170 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 CCDC115Q96NT0 180 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 KCTD14Q9BQ13 255 aaPredicted RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 SUCNR1Q9BXA5 334 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 ULBP3Q9BZM4 244 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 OR51E2Q9H255 320 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 TMEM100Q9NV29 134 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 RBM22Q9NW64 420 aaKnown RBP eCLIP1.84□□□□□ -2.11
SPG11-206ENST00000558093 DNAJC27Q9NZQ0 273 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 CALML5Q9NZT1 146 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 DHCR7Q9UBM7 475 aaKnown RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 ZNF230Q9UIE0 474 aaPredicted RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 PYCARDQ9ULZ3 195 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 HDGFL3Q9Y3E1 203 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 MYH9P35579 1960 aaKnown RBP1.84□□□□□ -2.11
SPG11-206ENST00000558093 FAM135AQ9P2D6 1515 aa1.84□□□□□ -2.11
SPG11-206ENST00000558093 PTPRJQ12913 1337 aa1.84□□□□□ -2.12
SPG11-206ENST00000558093 EIF4G3O43432 1585 aaKnown RBP1.84□□□□□ -2.12
SPG11-206ENST00000558093 HECW2Q9P2P5 1572 aa1.84□□□□□ -2.12
SPG11-206ENST00000558093 DHX57Q6P158 1386 aaKnown RBP1.84□□□□□ -2.12
SPG11-206ENST00000558093 IBTKQ9P2D0 1353 aaPredicted RBP1.84□□□□□ -2.12
SPG11-206ENST00000558093 KIF26AQ9ULI4 1882 aaPredicted RBP1.84□□□□□ -2.12
SPG11-206ENST00000558093 CAMTA1Q9Y6Y1 1673 aa1.83□□□□□ -2.12
SPG11-206ENST00000558093 WRNQ14191 1432 aaPredicted RBP eCLIP1.83□□□□□ -2.12
SPG11-206ENST00000558093 VPS8Q8N3P4 1428 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms