RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 ITGB1BP1O14713 200 aa13.14□□□□□ -0.31
NEDD4-212ENST00000557845 PRB2P02812 416 aaPredicted RBP13.14□□□□□ -0.31
NEDD4-212ENST00000557845 ACTBP60709 375 aa13.14□□□□□ -0.31
NEDD4-212ENST00000557845 HLA-DRB3P79483 266 aa13.14□□□□□ -0.31
NEDD4-212ENST00000557845 MMDQ15546 238 aa13.14□□□□□ -0.31
NEDD4-212ENST00000557845 C22orf42Q6IC83 251 aa13.14□□□□□ -0.31
NEDD4-212ENST00000557845 AGMATQ9BSE5 352 aa13.14□□□□□ -0.31
NEDD4-212ENST00000557845 PARP12Q9H0J9 701 aaKnown RBP13.14□□□□□ -0.31
NEDD4-212ENST00000557845 GHITMQ9H3K2 345 aa13.14□□□□□ -0.31
NEDD4-212ENST00000557845 KCNK7Q9Y2U2 307 aa13.14□□□□□ -0.31
NEDD4-212ENST00000557845 HSPA12AO43301 675 aa13.13□□□□□ -0.31
NEDD4-212ENST00000557845 SLC2A2P11168 524 aaPredicted RBP13.13□□□□□ -0.31
NEDD4-212ENST00000557845 MOGAT2Q3SYC2 334 aa13.13□□□□□ -0.31
NEDD4-212ENST00000557845 RPL39P5Q59GN2 51 aa13.13□□□□□ -0.31
NEDD4-212ENST00000557845 C18orf65Q6ZTR6 163 aa13.13□□□□□ -0.31
NEDD4-212ENST00000557845 PHF21AQ96BD5 680 aa13.13□□□□□ -0.31
NEDD4-212ENST00000557845 ABHD14BQ96IU4 210 aa13.13□□□□□ -0.31
NEDD4-212ENST00000557845 C11orf54Q9H0W9 315 aaPredicted RBP13.13□□□□□ -0.31
NEDD4-212ENST00000557845 OR1A1Q9P1Q5 309 aa13.13□□□□□ -0.31
NEDD4-212ENST00000557845 TRDCB7Z8K6 153 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 RRP9O43818 475 aaKnown RBP13.12□□□□□ -0.31
NEDD4-212ENST00000557845 IGF1P05019 195 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 CT45A6P0DMU7 189 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 CT45A5P0DMU8 189 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 CT45A7P0DMV0 189 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 RAB6AP20340 208 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 CNTFRP26992 372 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 PSMB9P28065 219 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 SLC6A1P30531 599 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 FGF9P31371 208 aaPredicted RBP13.12□□□□□ -0.31
NEDD4-212ENST00000557845 THBS3P49746 956 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 FOXB2Q5VYV0 432 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 C8orf86Q6ZUL3 223 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 REC114Q7Z4M0 266 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 NR2C2APQ86WQ0 139 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 OR10R2Q8NGX6 335 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 EDARADDQ8WWZ3 215 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 FCGR1BQ92637 280 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 PTX4Q96A99 478 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 RAB3CQ96E17 227 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 NECAP2Q9NVZ3 263 aa13.12□□□□□ -0.31
NEDD4-212ENST00000557845 TXNL4BQ9NX01 149 aaKnown RBP13.12□□□□□ -0.31
NEDD4-212ENST00000557845 ZNF107Q9UII5 783 aaPredicted RBP13.12□□□□□ -0.31
NEDD4-212ENST00000557845 IGKV1-6A0A0C4DH72 117 aa13.11□□□□□ -0.31
NEDD4-212ENST00000557845 RAB27BO00194 218 aa13.11□□□□□ -0.31
NEDD4-212ENST00000557845 NBR2O15453 112 aa13.11□□□□□ -0.31
NEDD4-212ENST00000557845 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
NEDD4-212ENST00000557845 CD3GP09693 182 aa13.11□□□□□ -0.31
NEDD4-212ENST00000557845 MRPS15P82914 257 aaKnown RBP13.11□□□□□ -0.31
NEDD4-212ENST00000557845 CFHR3Q02985 330 aa13.11□□□□□ -0.31
NEDD4-212ENST00000557845 ETV3LQ6ZN32 361 aa13.11□□□□□ -0.31
NEDD4-212ENST00000557845 MRPL41Q8IXM3 137 aaKnown RBP13.11□□□□□ -0.31
NEDD4-212ENST00000557845 LINC00482Q8N8I6 264 aa13.11□□□□□ -0.31
NEDD4-212ENST00000557845 KLHL30-AS1Q8NEE0 82 aa13.11□□□□□ -0.31
NEDD4-212ENST00000557845 NPBQ8NG41 125 aa13.11□□□□□ -0.31
NEDD4-212ENST00000557845 RCC1LQ96I51 464 aaKnown RBP13.11□□□□□ -0.31
NEDD4-212ENST00000557845 A0A0B4J203 849 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 METTL21EPA6NDL7 271 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 NUDT19A8MXV4 375 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 PROP1O75360 226 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 DUS4LO95620 317 aaKnown RBP13.1□□□□□ -0.31
NEDD4-212ENST00000557845 ELANEP08246 267 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 GNB3P16520 340 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 VDAC1P21796 283 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 GADD45AP24522 165 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 MC5RP33032 325 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 MYCNOSP40205 109 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 FOXE3Q13461 319 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 CXorf66Q5JRM2 361 aaPredicted RBP13.1□□□□□ -0.31
NEDD4-212ENST00000557845 LIN54Q6MZP7 749 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 FAM131AQ6UXB0 335 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 GLDNQ6ZMI3 551 aaPredicted RBP13.1□□□□□ -0.31
NEDD4-212ENST00000557845 ZNF695Q8IW36 515 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 CHCHD6Q9BRQ6 235 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 ZNF580Q9UK33 172 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 RNF150Q9ULK6 438 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 STUB1Q9UNE7 303 aa13.1□□□□□ -0.31
NEDD4-212ENST00000557845 PRKDCP78527 4128 aaKnown RBP13.1□□□□□ -0.31
NEDD4-212ENST00000557845 OR5H14A6NHG9 310 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 MFNGO00587 321 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 NDUFA3O95167 84 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 IGHG4P01861 327 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 HLA-DRB1P01911 266 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 FCGR3AP08637 254 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 CDX1P47902 265 aaPredicted RBP13.09□□□□□ -0.31
NEDD4-212ENST00000557845 C5orf64Q2M2E5 130 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 ZNF773Q6PK81 442 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 LCNL1Q6ZST4 164 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 RNF152Q8N8N0 203 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 OR5AN1Q8NGI8 311 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 OR4A4PQ8NGN8 299 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 KCTD7Q96MP8 289 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 TOLLIPQ9H0E2 274 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 OR51J1Q9H342 316 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 RDH8Q9NYR8 311 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 KIAA1456Q9P272 454 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 ZNF221Q9UK13 617 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 SSR3Q9UNL2 185 aa13.09□□□□□ -0.31
NEDD4-212ENST00000557845 A0A075B6Q4 140 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 IGHV7-81A0A0B4J1V7 117 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms