RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PIPOXQ9P0Z9 390 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 FOXA2Q9Y261 457 aaPredicted RBP12.3□□□□□ -0.44
SCFD1-224ENST00000557713 IGHV4OR15-8A0A075B7B6 117 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 A0A087WW49 117 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 EFCAB10A6NFE3 127 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 TRIM64CA6NLI5 447 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 CELP19835 753 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 GABPB1Q06547 395 aaPredicted RBP12.29□□□□□ -0.44
SCFD1-224ENST00000557713 TTC23Q5W5X9 447 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 ZNF880Q6PDB4 577 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 NEDD4LQ96PU5 975 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 GHITMQ9H3K2 345 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 ABRACLQ9P1F3 81 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 STEAP1Q9UHE8 339 aa12.29□□□□□ -0.44
SCFD1-224ENST00000557713 TENM2Q9NT68 2774 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 SORL1Q92673 2214 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 RAB29O14966 203 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 ST8SIA5O15466 376 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 NAPSAO96009 420 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
SCFD1-224ENST00000557713 UBBP0CG47 229 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 MC5RP33032 325 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 RPS27AP62979 156 aaKnown RBP12.28□□□□□ -0.44
SCFD1-224ENST00000557713 TMEM267Q0VDI3 215 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-224ENST00000557713 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 RPL39P5Q59GN2 51 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 OR10K2Q6IF99 312 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 LAIR2Q6ISS4 152 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 C6orf201Q7Z4U5 140 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 SETD9Q8NE22 299 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 OR6Q1Q8NGQ2 317 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 CYGBQ8WWM9 190 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 IL1F10Q8WWZ1 152 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 ARPC1AQ92747 370 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 THRSPQ92748 146 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 RHOVQ96L33 236 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 AGMATQ9BSE5 352 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 SLC23A1Q9UHI7 598 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 GAB2Q9UQC2 676 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 A3GALT2U3KPV4 340 aa12.28□□□□□ -0.44
SCFD1-224ENST00000557713 OR5H14A6NHG9 310 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 H0YJW9 148 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 OR8U9P0C7N5 309 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 LYL1P12980 280 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 MAPK3P27361 379 aaPredicted RBP12.27□□□□□ -0.45
SCFD1-224ENST00000557713 HTR2CP28335 458 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 WNT4P56705 351 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 INSL4Q14641 139 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 C1orf100Q5SVJ3 147 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 PYHIN1Q6K0P9 492 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 GLDNQ6ZMI3 551 aaPredicted RBP12.27□□□□□ -0.45
SCFD1-224ENST00000557713 PPP1R27Q86WC6 154 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 SVOPQ8N4V2 548 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 OR5AN1Q8NGI8 311 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 RNF5Q99942 180 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 PARP12Q9H0J9 701 aaKnown RBP12.27□□□□□ -0.45
SCFD1-224ENST00000557713 ZMAT4Q9H898 229 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 CNOT2Q9NZN8 540 aaKnown RBP12.27□□□□□ -0.45
SCFD1-224ENST00000557713 RNF150Q9ULK6 438 aa12.27□□□□□ -0.45
SCFD1-224ENST00000557713 ITGB1BP1O14713 200 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 PROP1O75360 226 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 RBBP9O75884 186 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 IGHV3-11P01762 117 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 CD37P11049 281 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 SNRPBP14678 240 aaKnown RBP12.26□□□□□ -0.45
SCFD1-224ENST00000557713 PLGLAQ15195 96 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 ACTBL2Q562R1 376 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 ZNF562Q6V9R5 426 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 LRRTM1Q86UE6 522 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 Q8N1Y9 231 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 DHRSXQ8N5I4 330 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 NANOGP1Q8N7R0 232 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 FLYWCH2Q96CP2 140 aaKnown RBP12.26□□□□□ -0.45
SCFD1-224ENST00000557713 ABHD14BQ96IU4 210 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 MS4A10Q96PG2 267 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 TM2D3Q9BRN9 247 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 NICN1Q9BSH3 213 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 FAM103A1Q9BTL3 118 aaKnown RBP12.26□□□□□ -0.45
SCFD1-224ENST00000557713 TM2D1Q9BX74 207 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 PSORS1C1Q9UIG5 152 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 WASHC3Q9Y3C0 194 aa12.26□□□□□ -0.45
SCFD1-224ENST00000557713 DNAH1Q9P2D7 4330 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 ARPC1BO15143 372 aaKnown RBP12.25□□□□□ -0.45
SCFD1-224ENST00000557713 GSTP1P09211 210 aaKnown RBP12.25□□□□□ -0.45
SCFD1-224ENST00000557713 QRFPP83859 136 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 PITPNAQ00169 270 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 UNC119Q13432 240 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 PSG5Q15238 335 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 ACSM3Q53FZ2 586 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 UNQ5815/PRO19632Q6UWF5 114 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 LFNGQ8NES3 379 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 KCNG3Q8TAE7 436 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 ABHD5Q8WTS1 349 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 OR4C12Q96R67 309 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 CITED4Q96RK1 184 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 CLCC1Q96S66 551 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 TMEM59Q9BXS4 323 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 C11orf54Q9H0W9 315 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-224ENST00000557713 PLCXD1Q9NUJ7 323 aa12.25□□□□□ -0.45
SCFD1-224ENST00000557713 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms