RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 OR4F6Q8NGB9 312 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OR4A4PQ8NGN8 299 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OR2G2Q8NGZ5 317 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OR56B4Q8NH76 319 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF418Q8TF45 676 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 Q8WTZ3 238 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 C7orf33Q8WU49 177 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RAB2BQ8WUD1 216 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 EEF1AKMT1Q8WVE0 214 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RAB8BQ92930 207 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM159Q96B96 161 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ZMYND19Q96E35 227 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CCDC126Q96EE4 140 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 REEP6Q96HR9 211 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 HYLS1Q96M11 299 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CCDC115Q96NT0 180 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 COPS8Q99627 209 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 GPR22Q99680 433 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 EFCAB11Q9BUY7 163 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SLC17A9Q9BYT1 436 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 DEFB126Q9BYW3 111 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OR2J1Q9GZK6 312 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 IFI27L2Q9H2X8 130 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CXorf21Q9HAI6 301 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 GPR84Q9NQS5 396 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FBXO6Q9NRD1 293 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SPANXA1Q9NS26 97 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FAM49BQ9NUQ9 324 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 HRASLS2Q9NWW9 162 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ANAPC11Q9NYG5 84 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RPS6KB2Q9UBS0 482 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 NAT8BQ9UHF3 227 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 BTRCQ9Y297 605 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 NEUROG3Q9Y4Z2 214 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 V9GYY9 64 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SIPA1L3O60292 1781 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 LY75O60449 1722 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 LTBP1Q14766 1721 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 PHRF1Q9P1Y6 1649 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ADGRB2O60241 1585 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 H0YJW9 148 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 H3BMH7 237 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 M0R3G1 203 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 PDE6DO43924 150 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TPST2O60704 377 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 C1orf105O95561 183 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 IFNW1P05000 195 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FABP3P05413 133 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SOD3P08294 240 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 IGFBP3P17936 291 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 USF1P22415 310 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 GPR1P46091 355 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 GABRA2P47869 451 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SLC18A1P54219 525 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ATP1B3P54709 279 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FOXA1P55317 472 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 DLX6P56179 175 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CLDN6P56747 220 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RAB5BP61020 215 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SELENOWP63302 87 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 IGLV3-21P80748 117 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 PSG4Q00888 419 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FMODQ06828 376 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 LAMTOR4Q0VGL1 99 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 PRDX4Q13162 271 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TRMT5Q32P41 509 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 KRTAP27-1Q3LI81 207 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TDRG1Q3Y452 100 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM244Q5VVB8 128 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 PRSS41Q7RTY9 318 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CMTM1Q8IZ96 169 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF567Q8N184 647 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OR2L13Q8N349 312 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ZADH2Q8N4Q0 377 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FAM71E2Q8N5Q1 922 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 EID2Q8N6I1 236 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 NKAPP1Q8N9T2 125 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OR4E2Q8NGC2 313 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OR9I1Q8NGQ6 314 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RFESDQ8TAC1 157 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FNDC9Q8TBE3 224 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 DCUN1D1Q96GG9 259 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CENPNQ96H22 339 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SMIM14Q96QK8 99 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CLCC1Q96S66 551 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 LINC01587Q99440 93 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 NRIP2Q9BQI9 281 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 VPS25Q9BRG1 176 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 DOHHQ9BU89 302 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OSBPL11Q9BXB4 747 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF436Q9C0F3 470 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SRMSQ9H3Y6 488 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 C16orf95Q9H693 158 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 NOX3Q9HBY0 568 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 C1orf123Q9NWV4 160 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OR1A1Q9P1Q5 309 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 GNG12Q9UBI6 72 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 BOKQ9UMX3 212 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RPL36Q9Y3U8 105 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 AP4S1Q9Y587 144 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms